Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC19.9■□□□□ 0.78
PDS5AQ29RF7 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC19.9■□□□□ 0.78
PDS5AQ29RF7 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDS5AQ29RF7 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.9■□□□□ 0.78
PDS5AQ29RF7 LY6E-204ENST00000519546 971 ntTSL 2 BASIC19.9■□□□□ 0.78
PDS5AQ29RF7 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC19.9■□□□□ 0.78
PDS5AQ29RF7 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDS5AQ29RF7 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.9■□□□□ 0.78
PDS5AQ29RF7 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PDS5AQ29RF7 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC19.9■□□□□ 0.78
PDS5AQ29RF7 NAA60-208ENST00000570819 833 ntTSL 2 BASIC19.9■□□□□ 0.78
PDS5AQ29RF7 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.9■□□□□ 0.78
PDS5AQ29RF7 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.9■□□□□ 0.78
PDS5AQ29RF7 SPDYE12P-201ENST00000618416 771 ntBASIC19.9■□□□□ 0.78
PDS5AQ29RF7 AC073592.8-201ENST00000624126 511 ntBASIC19.9■□□□□ 0.78
PDS5AQ29RF7 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDS5AQ29RF7 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDS5AQ29RF7 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDS5AQ29RF7 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDS5AQ29RF7 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDS5AQ29RF7 AL589702.1-201ENST00000641229 1509 ntBASIC19.9■□□□□ 0.78
PDS5AQ29RF7 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDS5AQ29RF7 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDS5AQ29RF7 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
PDS5AQ29RF7 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.89■□□□□ 0.78
PDS5AQ29RF7 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDS5AQ29RF7 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDS5AQ29RF7 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PDS5AQ29RF7 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
PDS5AQ29RF7 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PDS5AQ29RF7 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDS5AQ29RF7 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.89■□□□□ 0.77
PDS5AQ29RF7 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PDS5AQ29RF7 WDR53-203ENST00000429115 683 ntTSL 2 BASIC19.89■□□□□ 0.77
PDS5AQ29RF7 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDS5AQ29RF7 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.89■□□□□ 0.77
PDS5AQ29RF7 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC19.89■□□□□ 0.77
PDS5AQ29RF7 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC19.89■□□□□ 0.77
PDS5AQ29RF7 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDS5AQ29RF7 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDS5AQ29RF7 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PDS5AQ29RF7 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PDS5AQ29RF7 GGT3P-204ENST00000453783 1664 ntBASIC19.89■□□□□ 0.77
PDS5AQ29RF7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDS5AQ29RF7 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDS5AQ29RF7 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.89■□□□□ 0.77
PDS5AQ29RF7 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDS5AQ29RF7 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDS5AQ29RF7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDS5AQ29RF7 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDS5AQ29RF7 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDS5AQ29RF7 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDS5AQ29RF7 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDS5AQ29RF7 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.88■□□□□ 0.77
PDS5AQ29RF7 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.88■□□□□ 0.77
PDS5AQ29RF7 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDS5AQ29RF7 KLK8-202ENST00000320838 456 ntTSL 5 BASIC19.88■□□□□ 0.77
PDS5AQ29RF7 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.88■□□□□ 0.77
PDS5AQ29RF7 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDS5AQ29RF7 TSSK5P-201ENST00000423978 907 ntBASIC19.88■□□□□ 0.77
PDS5AQ29RF7 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC19.88■□□□□ 0.77
PDS5AQ29RF7 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDS5AQ29RF7 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC19.88■□□□□ 0.77
PDS5AQ29RF7 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC19.88■□□□□ 0.77
PDS5AQ29RF7 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC19.88■□□□□ 0.77
PDS5AQ29RF7 LITAF-210ENST00000571976 548 ntTSL 2 BASIC19.88■□□□□ 0.77
PDS5AQ29RF7 LITAF-214ENST00000574703 486 ntTSL 2 BASIC19.88■□□□□ 0.77
PDS5AQ29RF7 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19.88■□□□□ 0.77
PDS5AQ29RF7 AC061975.2-201ENST00000581722 295 ntBASIC19.88■□□□□ 0.77
PDS5AQ29RF7 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC19.88■□□□□ 0.77
PDS5AQ29RF7 AC003101.2-201ENST00000612557 442 ntBASIC19.88■□□□□ 0.77
PDS5AQ29RF7 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDS5AQ29RF7 AL390754.1-201ENST00000619088 582 ntBASIC19.88■□□□□ 0.77
PDS5AQ29RF7 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.88■□□□□ 0.77
PDS5AQ29RF7 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDS5AQ29RF7 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDS5AQ29RF7 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
PDS5AQ29RF7 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDS5AQ29RF7 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDS5AQ29RF7 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.88■□□□□ 0.77
PDS5AQ29RF7 AC005915.1-201ENST00000624912 2018 ntBASIC19.88■□□□□ 0.77
PDS5AQ29RF7 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDS5AQ29RF7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDS5AQ29RF7 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDS5AQ29RF7 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PDS5AQ29RF7 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.87■□□□□ 0.77
PDS5AQ29RF7 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PDS5AQ29RF7 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDS5AQ29RF7 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
PDS5AQ29RF7 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
PDS5AQ29RF7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDS5AQ29RF7 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDS5AQ29RF7 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDS5AQ29RF7 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC19.87■□□□□ 0.77
PDS5AQ29RF7 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC19.87■□□□□ 0.77
PDS5AQ29RF7 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.87■□□□□ 0.77
PDS5AQ29RF7 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC19.87■□□□□ 0.77
PDS5AQ29RF7 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC19.87■□□□□ 0.77
PDS5AQ29RF7 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PDS5AQ29RF7 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms