Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DDR1Q08345 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.53■□□□□ 0.88
DDR1Q08345 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DDR1Q08345 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC20.53■□□□□ 0.88
DDR1Q08345 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.53■□□□□ 0.88
DDR1Q08345 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
DDR1Q08345 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
DDR1Q08345 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC20.53■□□□□ 0.88
DDR1Q08345 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDR1Q08345 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC20.53■□□□□ 0.88
DDR1Q08345 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDR1Q08345 AC093724.1-201ENST00000448659 1027 ntBASIC20.53■□□□□ 0.88
DDR1Q08345 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC20.53■□□□□ 0.88
DDR1Q08345 FADS2-205ENST00000517839 469 ntTSL 3 BASIC20.53■□□□□ 0.88
DDR1Q08345 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC20.53■□□□□ 0.88
DDR1Q08345 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DDR1Q08345 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC20.53■□□□□ 0.88
DDR1Q08345 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
DDR1Q08345 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC20.53■□□□□ 0.88
DDR1Q08345 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DDR1Q08345 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC20.53■□□□□ 0.88
DDR1Q08345 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.53■□□□□ 0.88
DDR1Q08345 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDR1Q08345 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
DDR1Q08345 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDR1Q08345 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DDR1Q08345 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DDR1Q08345 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.53■□□□□ 0.88
DDR1Q08345 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
DDR1Q08345 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
DDR1Q08345 KRT8P39-201ENST00000396270 1433 ntBASIC20.53■□□□□ 0.88
DDR1Q08345 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.88
DDR1Q08345 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
DDR1Q08345 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC20.52■□□□□ 0.88
DDR1Q08345 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.52■□□□□ 0.88
DDR1Q08345 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
DDR1Q08345 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC20.52■□□□□ 0.88
DDR1Q08345 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC20.52■□□□□ 0.88
DDR1Q08345 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC20.52■□□□□ 0.88
DDR1Q08345 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
DDR1Q08345 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC20.52■□□□□ 0.88
DDR1Q08345 USB1-203ENST00000539737 1212 ntTSL 2 BASIC20.52■□□□□ 0.88
DDR1Q08345 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
DDR1Q08345 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC20.52■□□□□ 0.88
DDR1Q08345 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC20.52■□□□□ 0.88
DDR1Q08345 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC20.52■□□□□ 0.88
DDR1Q08345 MIR8072-201ENST00000614241 80 ntBASIC20.52■□□□□ 0.88
DDR1Q08345 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
DDR1Q08345 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
DDR1Q08345 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
DDR1Q08345 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC20.52■□□□□ 0.88
DDR1Q08345 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
DDR1Q08345 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
DDR1Q08345 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
DDR1Q08345 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDR1Q08345 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDR1Q08345 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDR1Q08345 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDR1Q08345 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDR1Q08345 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
DDR1Q08345 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DDR1Q08345 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC20.51■□□□□ 0.87
DDR1Q08345 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC20.51■□□□□ 0.87
DDR1Q08345 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DDR1Q08345 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
DDR1Q08345 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDR1Q08345 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDR1Q08345 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC20.51■□□□□ 0.87
DDR1Q08345 AL589702.1-201ENST00000641229 1509 ntBASIC20.51■□□□□ 0.87
DDR1Q08345 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDR1Q08345 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
DDR1Q08345 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDR1Q08345 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC20.51■□□□□ 0.87
DDR1Q08345 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
DDR1Q08345 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDR1Q08345 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
DDR1Q08345 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
DDR1Q08345 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
DDR1Q08345 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
DDR1Q08345 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDR1Q08345 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
DDR1Q08345 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
DDR1Q08345 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
DDR1Q08345 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDR1Q08345 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDR1Q08345 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDR1Q08345 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
DDR1Q08345 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
DDR1Q08345 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
DDR1Q08345 RPF1-202ENST00000370656 724 ntTSL 2 BASIC20.5■□□□□ 0.87
DDR1Q08345 VMO1-203ENST00000416307 712 ntTSL 2 BASIC20.5■□□□□ 0.87
DDR1Q08345 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC20.5■□□□□ 0.87
DDR1Q08345 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC20.5■□□□□ 0.87
DDR1Q08345 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC20.5■□□□□ 0.87
DDR1Q08345 MFF-223ENST00000524634 647 ntTSL 2 BASIC20.5■□□□□ 0.87
DDR1Q08345 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
DDR1Q08345 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DDR1Q08345 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC20.5■□□□□ 0.87
DDR1Q08345 AC092337.1-201ENST00000568699 1129 ntBASIC20.5■□□□□ 0.87
DDR1Q08345 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms