Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
TRA2BP62995 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRA2BP62995 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRA2BP62995 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.77■□□□□ 0.12
TRA2BP62995 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.77■□□□□ 0.12
TRA2BP62995 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRA2BP62995 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
TRA2BP62995 RNU1-129P-201ENST00000384064 167 ntBASIC15.77■□□□□ 0.12
TRA2BP62995 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TRA2BP62995 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.77■□□□□ 0.12
TRA2BP62995 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.77■□□□□ 0.12
TRA2BP62995 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.77■□□□□ 0.12
TRA2BP62995 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
TRA2BP62995 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.77■□□□□ 0.12
TRA2BP62995 U1.21-201ENST00000580816 167 ntBASIC15.77■□□□□ 0.12
TRA2BP62995 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.77■□□□□ 0.12
TRA2BP62995 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.77■□□□□ 0.12
TRA2BP62995 AC007064.4-201ENST00000637740 555 ntBASIC15.77■□□□□ 0.12
TRA2BP62995 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.77■□□□□ 0.12
TRA2BP62995 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRA2BP62995 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRA2BP62995 MTHFR-217ENST00000641820 1569 ntBASIC15.77■□□□□ 0.11
TRA2BP62995 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRA2BP62995 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRA2BP62995 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRA2BP62995 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TRA2BP62995 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.77■□□□□ 0.11
TRA2BP62995 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRA2BP62995 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRA2BP62995 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TRA2BP62995 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRA2BP62995 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRA2BP62995 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRA2BP62995 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TRA2BP62995 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TRA2BP62995 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRA2BP62995 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRA2BP62995 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
TRA2BP62995 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.76■□□□□ 0.11
TRA2BP62995 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRA2BP62995 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.76■□□□□ 0.11
TRA2BP62995 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TRA2BP62995 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRA2BP62995 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRA2BP62995 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.76■□□□□ 0.11
TRA2BP62995 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.76■□□□□ 0.11
TRA2BP62995 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRA2BP62995 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRA2BP62995 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRA2BP62995 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.76■□□□□ 0.11
TRA2BP62995 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRA2BP62995 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRA2BP62995 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRA2BP62995 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.76■□□□□ 0.11
TRA2BP62995 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.76■□□□□ 0.11
TRA2BP62995 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRA2BP62995 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.76■□□□□ 0.11
TRA2BP62995 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.76■□□□□ 0.11
TRA2BP62995 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.76■□□□□ 0.11
TRA2BP62995 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRA2BP62995 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRA2BP62995 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRA2BP62995 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.76■□□□□ 0.11
TRA2BP62995 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.76■□□□□ 0.11
TRA2BP62995 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.76■□□□□ 0.11
TRA2BP62995 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.76■□□□□ 0.11
TRA2BP62995 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRA2BP62995 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRA2BP62995 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRA2BP62995 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRA2BP62995 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.76■□□□□ 0.11
TRA2BP62995 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.76■□□□□ 0.11
TRA2BP62995 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.76■□□□□ 0.11
TRA2BP62995 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRA2BP62995 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.75■□□□□ 0.11
TRA2BP62995 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.75■□□□□ 0.11
TRA2BP62995 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.75■□□□□ 0.11
TRA2BP62995 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.75■□□□□ 0.11
TRA2BP62995 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TRA2BP62995 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.75■□□□□ 0.11
TRA2BP62995 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRA2BP62995 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRA2BP62995 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRA2BP62995 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRA2BP62995 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRA2BP62995 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRA2BP62995 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRA2BP62995 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRA2BP62995 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRA2BP62995 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRA2BP62995 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
TRA2BP62995 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRA2BP62995 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.75■□□□□ 0.11
TRA2BP62995 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.75■□□□□ 0.11
TRA2BP62995 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRA2BP62995 AC023141.13-201ENST00000604991 943 ntBASIC15.75■□□□□ 0.11
TRA2BP62995 AL031055.1-201ENST00000606362 631 ntBASIC15.75■□□□□ 0.11
TRA2BP62995 AC010507.1-201ENST00000633895 436 ntBASIC15.75■□□□□ 0.11
TRA2BP62995 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRA2BP62995 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms