Protein–RNA interactions for Protein: P59665

DEFA1, Neutrophil defensin 1, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA1P59665 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
DEFA1P59665 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
DEFA1P59665 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
DEFA1P59665 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
DEFA1P59665 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
DEFA1P59665 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
DEFA1P59665 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.72□□□□□ -0.05
DEFA1P59665 AC106881.1-201ENST00000605849 3329 ntBASIC14.72□□□□□ -0.05
DEFA1P59665 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.72□□□□□ -0.05
DEFA1P59665 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
DEFA1P59665 GGT4P-201ENST00000623672 1708 ntBASIC14.72□□□□□ -0.05
DEFA1P59665 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
DEFA1P59665 LINC01101-201ENST00000622953 1884 ntBASIC14.72□□□□□ -0.05
DEFA1P59665 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
DEFA1P59665 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
DEFA1P59665 FRMD8P1-201ENST00000440433 1524 ntBASIC14.71□□□□□ -0.05
DEFA1P59665 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
DEFA1P59665 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.71□□□□□ -0.05
DEFA1P59665 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
DEFA1P59665 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
DEFA1P59665 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.71□□□□□ -0.05
DEFA1P59665 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC14.71□□□□□ -0.05
DEFA1P59665 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
DEFA1P59665 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.71□□□□□ -0.05
DEFA1P59665 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.71□□□□□ -0.05
DEFA1P59665 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
DEFA1P59665 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
DEFA1P59665 CICP24-201ENST00000605464 2705 ntBASIC14.71□□□□□ -0.05
DEFA1P59665 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
DEFA1P59665 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
DEFA1P59665 MYCLP1-201ENST00000372451 1075 ntBASIC14.71□□□□□ -0.05
DEFA1P59665 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
DEFA1P59665 NIFKP9-201ENST00000419265 221 ntBASIC14.71□□□□□ -0.05
DEFA1P59665 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC14.71□□□□□ -0.05
DEFA1P59665 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC14.71□□□□□ -0.05
DEFA1P59665 THEM4-205ENST00000489410 643 ntTSL 2 BASIC14.71□□□□□ -0.05
DEFA1P59665 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC14.71□□□□□ -0.05
DEFA1P59665 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC14.71□□□□□ -0.05
DEFA1P59665 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC14.71□□□□□ -0.05
DEFA1P59665 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC14.71□□□□□ -0.05
DEFA1P59665 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC14.71□□□□□ -0.05
DEFA1P59665 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
DEFA1P59665 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
DEFA1P59665 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC14.71□□□□□ -0.05
DEFA1P59665 AC131212.1-201ENST00000613771 668 ntBASIC14.71□□□□□ -0.05
DEFA1P59665 RALB-208ENST00000631312 311 ntTSL 5 BASIC14.71□□□□□ -0.05
DEFA1P59665 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.71□□□□□ -0.05
DEFA1P59665 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.71□□□□□ -0.05
DEFA1P59665 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
DEFA1P59665 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
DEFA1P59665 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
DEFA1P59665 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
DEFA1P59665 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
DEFA1P59665 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.71□□□□□ -0.05
DEFA1P59665 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.71□□□□□ -0.05
DEFA1P59665 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
DEFA1P59665 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
DEFA1P59665 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.71□□□□□ -0.06
DEFA1P59665 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.71□□□□□ -0.06
DEFA1P59665 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
DEFA1P59665 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
DEFA1P59665 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
DEFA1P59665 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
DEFA1P59665 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
DEFA1P59665 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
DEFA1P59665 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
DEFA1P59665 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
DEFA1P59665 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
DEFA1P59665 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
DEFA1P59665 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
DEFA1P59665 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
DEFA1P59665 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
DEFA1P59665 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
DEFA1P59665 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
DEFA1P59665 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
DEFA1P59665 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
DEFA1P59665 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
DEFA1P59665 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
DEFA1P59665 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
DEFA1P59665 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC14.7□□□□□ -0.06
DEFA1P59665 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.7□□□□□ -0.06
DEFA1P59665 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
DEFA1P59665 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
DEFA1P59665 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC14.7□□□□□ -0.06
DEFA1P59665 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.7□□□□□ -0.06
DEFA1P59665 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.7□□□□□ -0.06
DEFA1P59665 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
DEFA1P59665 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
DEFA1P59665 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.7□□□□□ -0.06
DEFA1P59665 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
DEFA1P59665 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.7□□□□□ -0.06
DEFA1P59665 STK40-201ENST00000359297 4837 ntTSL 2 BASIC14.7□□□□□ -0.06
DEFA1P59665 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
DEFA1P59665 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
DEFA1P59665 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.7□□□□□ -0.06
DEFA1P59665 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.7□□□□□ -0.06
DEFA1P59665 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
DEFA1P59665 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
DEFA1P59665 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.7□□□□□ -0.06
DEFA1P59665 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms