Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SMIM11AP58511 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SMIM11AP58511 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SMIM11AP58511 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SMIM11AP58511 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SMIM11AP58511 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SMIM11AP58511 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SMIM11AP58511 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.48■□□□□ 0.07
SMIM11AP58511 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.48■□□□□ 0.07
SMIM11AP58511 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SMIM11AP58511 TOP3BP1-201ENST00000420768 1380 ntBASIC15.48■□□□□ 0.07
SMIM11AP58511 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SMIM11AP58511 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.48■□□□□ 0.07
SMIM11AP58511 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SMIM11AP58511 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SMIM11AP58511 GGT3P-204ENST00000453783 1664 ntBASIC15.48■□□□□ 0.07
SMIM11AP58511 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SMIM11AP58511 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SMIM11AP58511 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SMIM11AP58511 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SMIM11AP58511 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.47■□□□□ 0.07
SMIM11AP58511 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
SMIM11AP58511 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.47■□□□□ 0.07
SMIM11AP58511 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
SMIM11AP58511 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SMIM11AP58511 AL590787.1-201ENST00000568856 1315 ntBASIC15.47■□□□□ 0.07
SMIM11AP58511 AC005332.1-201ENST00000577698 1310 ntBASIC15.47■□□□□ 0.07
SMIM11AP58511 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SMIM11AP58511 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.47■□□□□ 0.07
SMIM11AP58511 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SMIM11AP58511 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.47■□□□□ 0.07
SMIM11AP58511 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SMIM11AP58511 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.47■□□□□ 0.07
SMIM11AP58511 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.47■□□□□ 0.07
SMIM11AP58511 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
SMIM11AP58511 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SMIM11AP58511 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SMIM11AP58511 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SMIM11AP58511 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SMIM11AP58511 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SMIM11AP58511 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SMIM11AP58511 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.47■□□□□ 0.07
SMIM11AP58511 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SMIM11AP58511 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SMIM11AP58511 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SMIM11AP58511 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.47■□□□□ 0.07
SMIM11AP58511 IGHV3-47-201ENST00000425060 335 ntBASIC15.47■□□□□ 0.07
SMIM11AP58511 PRYP5-201ENST00000451909 266 ntBASIC15.47■□□□□ 0.07
SMIM11AP58511 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SMIM11AP58511 TOB2P1-201ENST00000469761 992 ntBASIC15.47■□□□□ 0.07
SMIM11AP58511 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.47■□□□□ 0.07
SMIM11AP58511 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.47■□□□□ 0.07
SMIM11AP58511 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.47■□□□□ 0.07
SMIM11AP58511 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.47■□□□□ 0.07
SMIM11AP58511 TPSP2-201ENST00000561760 610 ntBASIC15.47■□□□□ 0.07
SMIM11AP58511 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.47■□□□□ 0.07
SMIM11AP58511 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC15.47■□□□□ 0.07
SMIM11AP58511 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
SMIM11AP58511 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.47■□□□□ 0.07
SMIM11AP58511 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SMIM11AP58511 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SMIM11AP58511 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SMIM11AP58511 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.47■□□□□ 0.07
SMIM11AP58511 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.47■□□□□ 0.07
SMIM11AP58511 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SMIM11AP58511 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SMIM11AP58511 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SMIM11AP58511 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.47■□□□□ 0.07
SMIM11AP58511 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
SMIM11AP58511 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SMIM11AP58511 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SMIM11AP58511 AC008894.3-201ENST00000624324 3103 ntBASIC15.47■□□□□ 0.07
SMIM11AP58511 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.47■□□□□ 0.07
SMIM11AP58511 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SMIM11AP58511 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
SMIM11AP58511 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SMIM11AP58511 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SMIM11AP58511 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SMIM11AP58511 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SMIM11AP58511 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
SMIM11AP58511 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SMIM11AP58511 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.46■□□□□ 0.07
SMIM11AP58511 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.46■□□□□ 0.07
SMIM11AP58511 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.46■□□□□ 0.07
SMIM11AP58511 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.46■□□□□ 0.07
SMIM11AP58511 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.46■□□□□ 0.07
SMIM11AP58511 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SMIM11AP58511 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SMIM11AP58511 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
SMIM11AP58511 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SMIM11AP58511 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.46■□□□□ 0.07
SMIM11AP58511 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
SMIM11AP58511 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
SMIM11AP58511 AL031133.1-201ENST00000406807 723 ntBASIC15.46■□□□□ 0.07
SMIM11AP58511 RN7SL850P-201ENST00000579959 291 ntBASIC15.46■□□□□ 0.07
SMIM11AP58511 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.46■□□□□ 0.07
SMIM11AP58511 AL353135.1-201ENST00000606729 504 ntBASIC15.46■□□□□ 0.07
SMIM11AP58511 AL590326.2-201ENST00000625139 305 ntBASIC15.46■□□□□ 0.07
SMIM11AP58511 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
SMIM11AP58511 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms