Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EFNA3P52797 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.65■□□□□ 0.1
EFNA3P52797 PMS2P2-201ENST00000425039 1128 ntBASIC15.65■□□□□ 0.1
EFNA3P52797 SPCS2P4-201ENST00000436160 681 ntBASIC15.65■□□□□ 0.1
EFNA3P52797 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
EFNA3P52797 METTL21AP1-201ENST00000438852 635 ntBASIC15.65■□□□□ 0.1
EFNA3P52797 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
EFNA3P52797 AC069335.1-201ENST00000489972 472 ntBASIC15.65■□□□□ 0.1
EFNA3P52797 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
EFNA3P52797 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.65■□□□□ 0.1
EFNA3P52797 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.65■□□□□ 0.1
EFNA3P52797 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.65■□□□□ 0.1
EFNA3P52797 LINC01225-203ENST00000563550 1244 ntBASIC15.65■□□□□ 0.1
EFNA3P52797 MIR3909-201ENST00000579518 119 ntBASIC15.65■□□□□ 0.1
EFNA3P52797 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EFNA3P52797 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
EFNA3P52797 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
EFNA3P52797 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
EFNA3P52797 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.65■□□□□ 0.1
EFNA3P52797 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
EFNA3P52797 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EFNA3P52797 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
EFNA3P52797 AL391256.1-201ENST00000443260 1855 ntBASIC15.65■□□□□ 0.1
EFNA3P52797 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
EFNA3P52797 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
EFNA3P52797 KRT18P28-201ENST00000453838 1332 ntBASIC15.65■□□□□ 0.1
EFNA3P52797 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
EFNA3P52797 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.1
EFNA3P52797 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
EFNA3P52797 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
EFNA3P52797 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
EFNA3P52797 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
EFNA3P52797 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
EFNA3P52797 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
EFNA3P52797 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.64■□□□□ 0.09
EFNA3P52797 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
EFNA3P52797 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
EFNA3P52797 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
EFNA3P52797 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
EFNA3P52797 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
EFNA3P52797 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
EFNA3P52797 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
EFNA3P52797 AC078925.2-201ENST00000624013 1973 ntBASIC15.64■□□□□ 0.09
EFNA3P52797 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
EFNA3P52797 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
EFNA3P52797 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
EFNA3P52797 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
EFNA3P52797 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.64■□□□□ 0.09
EFNA3P52797 FAM58DP-201ENST00000428076 619 ntBASIC15.64■□□□□ 0.09
EFNA3P52797 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.64■□□□□ 0.09
EFNA3P52797 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
EFNA3P52797 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
EFNA3P52797 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.64■□□□□ 0.09
EFNA3P52797 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
EFNA3P52797 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.64■□□□□ 0.09
EFNA3P52797 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.64■□□□□ 0.09
EFNA3P52797 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
EFNA3P52797 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.64■□□□□ 0.09
EFNA3P52797 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.64■□□□□ 0.09
EFNA3P52797 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
EFNA3P52797 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
EFNA3P52797 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
EFNA3P52797 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
EFNA3P52797 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.64■□□□□ 0.09
EFNA3P52797 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.64■□□□□ 0.09
EFNA3P52797 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
EFNA3P52797 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
EFNA3P52797 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
EFNA3P52797 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.64■□□□□ 0.09
EFNA3P52797 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
EFNA3P52797 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
EFNA3P52797 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.63■□□□□ 0.09
EFNA3P52797 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.63■□□□□ 0.09
EFNA3P52797 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
EFNA3P52797 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.63■□□□□ 0.09
EFNA3P52797 AL603756.1-201ENST00000606511 2163 ntBASIC15.63■□□□□ 0.09
EFNA3P52797 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
EFNA3P52797 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
EFNA3P52797 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
EFNA3P52797 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
EFNA3P52797 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
EFNA3P52797 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
EFNA3P52797 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
EFNA3P52797 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
EFNA3P52797 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.63■□□□□ 0.09
EFNA3P52797 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.63■□□□□ 0.09
EFNA3P52797 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
EFNA3P52797 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
EFNA3P52797 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
EFNA3P52797 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
EFNA3P52797 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.63■□□□□ 0.09
EFNA3P52797 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.63■□□□□ 0.09
EFNA3P52797 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.63■□□□□ 0.09
EFNA3P52797 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.63■□□□□ 0.09
EFNA3P52797 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.63■□□□□ 0.09
EFNA3P52797 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.63■□□□□ 0.09
EFNA3P52797 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
EFNA3P52797 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.63■□□□□ 0.09
EFNA3P52797 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
EFNA3P52797 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms