Protein–RNA interactions for Protein: P49674

CSNK1E, Casein kinase I isoform epsilon, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1EP49674 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CSNK1EP49674 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.32■□□□□ 0.2
CSNK1EP49674 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC16.32■□□□□ 0.2
CSNK1EP49674 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CSNK1EP49674 AL589739.1-201ENST00000607720 493 ntBASIC16.32■□□□□ 0.2
CSNK1EP49674 AL008721.1-201ENST00000609964 604 ntBASIC16.32■□□□□ 0.2
CSNK1EP49674 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.32■□□□□ 0.2
CSNK1EP49674 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1EP49674 AC073439.1-201ENST00000624121 1774 ntBASIC16.32■□□□□ 0.2
CSNK1EP49674 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CSNK1EP49674 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CSNK1EP49674 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CSNK1EP49674 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CSNK1EP49674 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CSNK1EP49674 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1EP49674 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CSNK1EP49674 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.31■□□□□ 0.2
CSNK1EP49674 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CSNK1EP49674 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.31■□□□□ 0.2
CSNK1EP49674 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.31■□□□□ 0.2
CSNK1EP49674 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1EP49674 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1EP49674 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.31■□□□□ 0.2
CSNK1EP49674 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.31■□□□□ 0.2
CSNK1EP49674 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.31■□□□□ 0.2
CSNK1EP49674 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CSNK1EP49674 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CSNK1EP49674 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1EP49674 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1EP49674 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1EP49674 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.31■□□□□ 0.2
CSNK1EP49674 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.31■□□□□ 0.2
CSNK1EP49674 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1EP49674 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1EP49674 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.31■□□□□ 0.2
CSNK1EP49674 AC009407.1-201ENST00000568958 598 ntBASIC16.31■□□□□ 0.2
CSNK1EP49674 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.31■□□□□ 0.2
CSNK1EP49674 TEX28P1-201ENST00000613479 1221 ntBASIC16.31■□□□□ 0.2
CSNK1EP49674 TEX28P2-201ENST00000617764 1221 ntBASIC16.31■□□□□ 0.2
CSNK1EP49674 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.31■□□□□ 0.2
CSNK1EP49674 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1EP49674 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1EP49674 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1EP49674 CETN4P-206ENST00000642099 2168 ntBASIC16.31■□□□□ 0.2
CSNK1EP49674 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1EP49674 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CSNK1EP49674 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1EP49674 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.31■□□□□ 0.2
CSNK1EP49674 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.31■□□□□ 0.2
CSNK1EP49674 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CSNK1EP49674 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.31■□□□□ 0.2
CSNK1EP49674 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.31■□□□□ 0.2
CSNK1EP49674 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CSNK1EP49674 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1EP49674 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1EP49674 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CSNK1EP49674 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.3■□□□□ 0.2
CSNK1EP49674 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1EP49674 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1EP49674 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1EP49674 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1EP49674 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.3■□□□□ 0.2
CSNK1EP49674 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1EP49674 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1EP49674 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1EP49674 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1EP49674 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1EP49674 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1EP49674 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.3■□□□□ 0.2
CSNK1EP49674 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.3■□□□□ 0.2
CSNK1EP49674 RPL37AP1-201ENST00000412502 279 ntBASIC16.3■□□□□ 0.2
CSNK1EP49674 COX5BP8-201ENST00000416911 349 ntBASIC16.3■□□□□ 0.2
CSNK1EP49674 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CSNK1EP49674 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.3■□□□□ 0.2
CSNK1EP49674 AC009477.1-201ENST00000452936 217 ntBASIC16.3■□□□□ 0.2
CSNK1EP49674 MEIS3P1-201ENST00000495167 958 ntBASIC16.3■□□□□ 0.2
CSNK1EP49674 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1EP49674 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.3■□□□□ 0.2
CSNK1EP49674 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.3■□□□□ 0.2
CSNK1EP49674 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.3■□□□□ 0.2
CSNK1EP49674 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.3■□□□□ 0.2
CSNK1EP49674 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.3■□□□□ 0.2
CSNK1EP49674 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.3■□□□□ 0.2
CSNK1EP49674 RN7SL828P-201ENST00000607615 303 ntBASIC16.3■□□□□ 0.2
CSNK1EP49674 AC008738.7-201ENST00000609744 511 ntBASIC16.3■□□□□ 0.2
CSNK1EP49674 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1EP49674 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1EP49674 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1EP49674 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1EP49674 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.3■□□□□ 0.2
CSNK1EP49674 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1EP49674 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1EP49674 PKD1P1-201ENST00000458669 6805 ntBASIC16.3■□□□□ 0.2
CSNK1EP49674 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CSNK1EP49674 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1EP49674 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1EP49674 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CSNK1EP49674 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CSNK1EP49674 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CSNK1EP49674 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms