Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.93□□□□□ -0.02
SRP9P49458 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SRP9P49458 AL691432.3-201ENST00000621860 400 ntBASIC14.93□□□□□ -0.02
SRP9P49458 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SRP9P49458 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRP9P49458 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRP9P49458 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRP9P49458 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRP9P49458 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRP9P49458 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRP9P49458 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRP9P49458 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC14.93□□□□□ -0.02
SRP9P49458 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
SRP9P49458 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRP9P49458 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRP9P49458 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
SRP9P49458 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
SRP9P49458 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
SRP9P49458 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRP9P49458 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
SRP9P49458 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SRP9P49458 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SRP9P49458 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.92□□□□□ -0.02
SRP9P49458 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.92□□□□□ -0.02
SRP9P49458 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRP9P49458 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRP9P49458 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.92□□□□□ -0.02
SRP9P49458 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRP9P49458 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRP9P49458 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRP9P49458 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRP9P49458 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
SRP9P49458 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SRP9P49458 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.92□□□□□ -0.02
SRP9P49458 DUSP5P1-201ENST00000441325 1139 ntBASIC14.92□□□□□ -0.02
SRP9P49458 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.92□□□□□ -0.02
SRP9P49458 ABCD1P5-201ENST00000445663 754 ntBASIC14.92□□□□□ -0.02
SRP9P49458 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.92□□□□□ -0.02
SRP9P49458 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
SRP9P49458 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SRP9P49458 AL732292.2-201ENST00000609649 430 ntBASIC14.92□□□□□ -0.02
SRP9P49458 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC14.92□□□□□ -0.02
SRP9P49458 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.92□□□□□ -0.02
SRP9P49458 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.92□□□□□ -0.02
SRP9P49458 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.92□□□□□ -0.02
SRP9P49458 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.92□□□□□ -0.02
SRP9P49458 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRP9P49458 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRP9P49458 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRP9P49458 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SRP9P49458 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.92□□□□□ -0.02
SRP9P49458 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.92□□□□□ -0.02
SRP9P49458 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.92□□□□□ -0.02
SRP9P49458 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRP9P49458 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SRP9P49458 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRP9P49458 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRP9P49458 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRP9P49458 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SRP9P49458 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRP9P49458 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SRP9P49458 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SRP9P49458 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRP9P49458 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRP9P49458 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SRP9P49458 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SRP9P49458 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRP9P49458 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRP9P49458 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRP9P49458 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.91□□□□□ -0.02
SRP9P49458 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.91□□□□□ -0.02
SRP9P49458 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.91□□□□□ -0.02
SRP9P49458 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SRP9P49458 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRP9P49458 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SRP9P49458 AL450487.1-201ENST00000426799 995 ntBASIC14.91□□□□□ -0.02
SRP9P49458 AC132008.2-207ENST00000454517 770 ntBASIC14.91□□□□□ -0.02
SRP9P49458 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.91□□□□□ -0.02
SRP9P49458 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.91□□□□□ -0.02
SRP9P49458 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.91□□□□□ -0.02
SRP9P49458 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.91□□□□□ -0.02
SRP9P49458 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SRP9P49458 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.91□□□□□ -0.02
SRP9P49458 IFNL4P1-201ENST00000607083 540 ntBASIC14.91□□□□□ -0.02
SRP9P49458 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SRP9P49458 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.91□□□□□ -0.02
SRP9P49458 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SRP9P49458 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SRP9P49458 AC092384.3-202ENST00000564646 2873 ntBASIC14.91□□□□□ -0.02
SRP9P49458 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
SRP9P49458 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.91□□□□□ -0.02
SRP9P49458 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRP9P49458 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRP9P49458 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.91□□□□□ -0.02
SRP9P49458 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRP9P49458 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.91□□□□□ -0.02
SRP9P49458 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.91□□□□□ -0.02
SRP9P49458 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRP9P49458 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
SRP9P49458 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms