Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC13.69□□□□□ -0.22
CEACAM3P40198 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.69□□□□□ -0.22
CEACAM3P40198 AL022342.1-201ENST00000400363 863 ntBASIC13.69□□□□□ -0.22
CEACAM3P40198 MED15P5-201ENST00000423150 992 ntBASIC13.69□□□□□ -0.22
CEACAM3P40198 AL513480.1-201ENST00000451731 511 ntBASIC13.69□□□□□ -0.22
CEACAM3P40198 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.69□□□□□ -0.22
CEACAM3P40198 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.69□□□□□ -0.22
CEACAM3P40198 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.69□□□□□ -0.22
CEACAM3P40198 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.69□□□□□ -0.22
CEACAM3P40198 DUX4L17-201ENST00000557360 1267 ntBASIC13.69□□□□□ -0.22
CEACAM3P40198 AC087641.1-201ENST00000557561 1021 ntBASIC13.69□□□□□ -0.22
CEACAM3P40198 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CEACAM3P40198 AC034105.1-201ENST00000563488 319 ntBASIC13.69□□□□□ -0.22
CEACAM3P40198 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CEACAM3P40198 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.69□□□□□ -0.22
CEACAM3P40198 FAM197Y3-203ENST00000618346 717 ntBASIC13.69□□□□□ -0.22
CEACAM3P40198 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.69□□□□□ -0.22
CEACAM3P40198 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CEACAM3P40198 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CEACAM3P40198 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CEACAM3P40198 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CEACAM3P40198 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.69□□□□□ -0.22
CEACAM3P40198 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CEACAM3P40198 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CEACAM3P40198 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CEACAM3P40198 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CEACAM3P40198 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CEACAM3P40198 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CEACAM3P40198 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CEACAM3P40198 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CEACAM3P40198 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CEACAM3P40198 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC13.68□□□□□ -0.22
CEACAM3P40198 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CEACAM3P40198 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CEACAM3P40198 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CEACAM3P40198 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CEACAM3P40198 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC13.68□□□□□ -0.22
CEACAM3P40198 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CEACAM3P40198 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CEACAM3P40198 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CEACAM3P40198 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CEACAM3P40198 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC13.68□□□□□ -0.22
CEACAM3P40198 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CEACAM3P40198 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC13.68□□□□□ -0.22
CEACAM3P40198 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CEACAM3P40198 AC131009.4-201ENST00000624048 1740 ntBASIC13.68□□□□□ -0.22
CEACAM3P40198 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CEACAM3P40198 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC13.68□□□□□ -0.22
CEACAM3P40198 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CEACAM3P40198 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CEACAM3P40198 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC13.68□□□□□ -0.22
CEACAM3P40198 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CEACAM3P40198 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CEACAM3P40198 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CEACAM3P40198 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CEACAM3P40198 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.68□□□□□ -0.22
CEACAM3P40198 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CEACAM3P40198 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.68□□□□□ -0.22
CEACAM3P40198 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CEACAM3P40198 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
CEACAM3P40198 FAM185BP-201ENST00000443595 716 ntBASIC13.68□□□□□ -0.22
CEACAM3P40198 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CEACAM3P40198 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CEACAM3P40198 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13.68□□□□□ -0.22
CEACAM3P40198 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC13.68□□□□□ -0.22
CEACAM3P40198 AC107918.2-201ENST00000530817 355 ntBASIC13.68□□□□□ -0.22
CEACAM3P40198 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.68□□□□□ -0.22
CEACAM3P40198 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CEACAM3P40198 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.68□□□□□ -0.22
CEACAM3P40198 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.68□□□□□ -0.22
CEACAM3P40198 AC096734.2-201ENST00000562054 433 ntBASIC13.68□□□□□ -0.22
CEACAM3P40198 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC13.68□□□□□ -0.22
CEACAM3P40198 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CEACAM3P40198 MPDU1-223ENST00000582151 728 ntBASIC13.68□□□□□ -0.22
CEACAM3P40198 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13.68□□□□□ -0.22
CEACAM3P40198 PIN1-206ENST00000587625 878 ntTSL 2 BASIC13.68□□□□□ -0.22
CEACAM3P40198 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC13.68□□□□□ -0.22
CEACAM3P40198 AC064836.3-201ENST00000607928 673 ntBASIC13.68□□□□□ -0.22
CEACAM3P40198 AL645728.2-201ENST00000641974 660 ntBASIC13.68□□□□□ -0.22
CEACAM3P40198 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CEACAM3P40198 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
CEACAM3P40198 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CEACAM3P40198 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CEACAM3P40198 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CEACAM3P40198 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC13.68□□□□□ -0.22
CEACAM3P40198 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC13.68□□□□□ -0.22
CEACAM3P40198 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC13.68□□□□□ -0.22
CEACAM3P40198 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CEACAM3P40198 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CEACAM3P40198 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CEACAM3P40198 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CEACAM3P40198 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CEACAM3P40198 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC13.68□□□□□ -0.22
CEACAM3P40198 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CEACAM3P40198 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CEACAM3P40198 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CEACAM3P40198 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CEACAM3P40198 LINC00895-201ENST00000629028 1637 ntBASIC13.68□□□□□ -0.22
CEACAM3P40198 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC13.68□□□□□ -0.22
CEACAM3P40198 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms