Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNCAP37840 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SNCAP37840 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
SNCAP37840 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SNCAP37840 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNCAP37840 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNCAP37840 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNCAP37840 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNCAP37840 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SNCAP37840 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC13.85□□□□□ -0.19
SNCAP37840 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC13.85□□□□□ -0.19
SNCAP37840 AC109462.3-201ENST00000573934 613 ntBASIC13.85□□□□□ -0.19
SNCAP37840 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC13.85□□□□□ -0.19
SNCAP37840 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC13.85□□□□□ -0.19
SNCAP37840 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNCAP37840 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNCAP37840 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SNCAP37840 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC13.85□□□□□ -0.19
SNCAP37840 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNCAP37840 AL161772.1-201ENST00000610494 4412 ntBASIC13.85□□□□□ -0.19
SNCAP37840 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNCAP37840 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNCAP37840 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNCAP37840 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNCAP37840 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
SNCAP37840 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SNCAP37840 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.85□□□□□ -0.19
SNCAP37840 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNCAP37840 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SNCAP37840 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SNCAP37840 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
SNCAP37840 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
SNCAP37840 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNCAP37840 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNCAP37840 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNCAP37840 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.84□□□□□ -0.19
SNCAP37840 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNCAP37840 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC13.84□□□□□ -0.19
SNCAP37840 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNCAP37840 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC13.84□□□□□ -0.19
SNCAP37840 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.84□□□□□ -0.19
SNCAP37840 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.84□□□□□ -0.19
SNCAP37840 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.84□□□□□ -0.19
SNCAP37840 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNCAP37840 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SNCAP37840 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNCAP37840 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC13.84□□□□□ -0.19
SNCAP37840 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SNCAP37840 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.84□□□□□ -0.19
SNCAP37840 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SNCAP37840 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNCAP37840 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNCAP37840 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SNCAP37840 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SNCAP37840 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNCAP37840 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
SNCAP37840 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNCAP37840 AC005521.1-201ENST00000393351 872 ntBASIC13.84□□□□□ -0.19
SNCAP37840 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC13.84□□□□□ -0.19
SNCAP37840 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
SNCAP37840 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SNCAP37840 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
SNCAP37840 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SNCAP37840 TK2-213ENST00000563369 882 ntTSL 5 BASIC13.84□□□□□ -0.19
SNCAP37840 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SNCAP37840 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC13.84□□□□□ -0.19
SNCAP37840 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SNCAP37840 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SNCAP37840 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SNCAP37840 AC066615.1-201ENST00000640911 628 ntBASIC13.84□□□□□ -0.19
SNCAP37840 AC097493.4-201ENST00000641197 219 ntBASIC13.84□□□□□ -0.19
SNCAP37840 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SNCAP37840 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC13.84□□□□□ -0.19
SNCAP37840 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNCAP37840 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNCAP37840 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNCAP37840 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNCAP37840 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNCAP37840 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
SNCAP37840 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNCAP37840 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNCAP37840 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
SNCAP37840 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SNCAP37840 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC13.84□□□□□ -0.19
SNCAP37840 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SNCAP37840 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SNCAP37840 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
SNCAP37840 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
SNCAP37840 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SNCAP37840 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SNCAP37840 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.83□□□□□ -0.19
SNCAP37840 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.83□□□□□ -0.19
SNCAP37840 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SNCAP37840 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC13.83□□□□□ -0.2
SNCAP37840 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SNCAP37840 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNCAP37840 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNCAP37840 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SNCAP37840 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.83□□□□□ -0.2
SNCAP37840 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms