Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 AC010327.4-202ENST00000591484 748 ntBASIC17.69■□□□□ 0.42
CHKAP35790 AC007064.4-201ENST00000637740 555 ntBASIC17.69■□□□□ 0.42
CHKAP35790 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CHKAP35790 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHKAP35790 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHKAP35790 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHKAP35790 AC026691.1-201ENST00000602502 2017 ntBASIC17.69■□□□□ 0.42
CHKAP35790 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
CHKAP35790 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
CHKAP35790 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.68■□□□□ 0.42
CHKAP35790 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.68■□□□□ 0.42
CHKAP35790 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHKAP35790 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHKAP35790 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHKAP35790 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHKAP35790 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHKAP35790 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHKAP35790 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHKAP35790 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CHKAP35790 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHKAP35790 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.68■□□□□ 0.42
CHKAP35790 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHKAP35790 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHKAP35790 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHKAP35790 EGFEM1P-202ENST00000431685 1563 ntBASIC17.68■□□□□ 0.42
CHKAP35790 RHOQP3-201ENST00000437982 621 ntBASIC17.68■□□□□ 0.42
CHKAP35790 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.68■□□□□ 0.42
CHKAP35790 CXCL1P1-201ENST00000502804 216 ntBASIC17.68■□□□□ 0.42
CHKAP35790 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHKAP35790 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHKAP35790 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.68■□□□□ 0.42
CHKAP35790 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.68■□□□□ 0.42
CHKAP35790 AC018845.2-201ENST00000568326 409 ntBASIC17.68■□□□□ 0.42
CHKAP35790 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.68■□□□□ 0.42
CHKAP35790 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CHKAP35790 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
CHKAP35790 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.68■□□□□ 0.42
CHKAP35790 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CHKAP35790 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHKAP35790 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHKAP35790 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHKAP35790 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHKAP35790 AC129492.6-201ENST00000611383 1305 ntBASIC17.68■□□□□ 0.42
CHKAP35790 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.68■□□□□ 0.42
CHKAP35790 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHKAP35790 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CHKAP35790 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHKAP35790 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHKAP35790 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CHKAP35790 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.67■□□□□ 0.42
CHKAP35790 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHKAP35790 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CHKAP35790 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CHKAP35790 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CHKAP35790 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHKAP35790 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHKAP35790 AL162727.3-201ENST00000635661 2787 ntBASIC17.67■□□□□ 0.42
CHKAP35790 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHKAP35790 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.67■□□□□ 0.42
CHKAP35790 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.67■□□□□ 0.42
CHKAP35790 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHKAP35790 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.67■□□□□ 0.42
CHKAP35790 AC112482.1-201ENST00000492080 688 ntBASIC17.67■□□□□ 0.42
CHKAP35790 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHKAP35790 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
CHKAP35790 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.67■□□□□ 0.42
CHKAP35790 AC010507.1-201ENST00000633895 436 ntBASIC17.67■□□□□ 0.42
CHKAP35790 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHKAP35790 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CHKAP35790 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHKAP35790 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHKAP35790 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHKAP35790 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CHKAP35790 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CHKAP35790 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CHKAP35790 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.67■□□□□ 0.42
CHKAP35790 AL391005.1-201ENST00000623953 2435 ntBASIC17.67■□□□□ 0.42
CHKAP35790 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CHKAP35790 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
CHKAP35790 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHKAP35790 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHKAP35790 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHKAP35790 PCDHB17P-201ENST00000539533 2393 ntBASIC17.66■□□□□ 0.42
CHKAP35790 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.66■□□□□ 0.42
CHKAP35790 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHKAP35790 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHKAP35790 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CHKAP35790 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CHKAP35790 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
CHKAP35790 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.66■□□□□ 0.42
CHKAP35790 AC087163.2-201ENST00000457299 853 ntBASIC17.66■□□□□ 0.42
CHKAP35790 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.66■□□□□ 0.42
CHKAP35790 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.66■□□□□ 0.42
CHKAP35790 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.66■□□□□ 0.42
CHKAP35790 AC023141.13-201ENST00000604991 943 ntBASIC17.66■□□□□ 0.42
CHKAP35790 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.66■□□□□ 0.42
CHKAP35790 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.66■□□□□ 0.42
CHKAP35790 AC004877.2-201ENST00000623941 599 ntBASIC17.66■□□□□ 0.42
CHKAP35790 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CHKAP35790 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms