Protein–RNA interactions for Protein: P35269

GTF2F1, General transcription factor IIF subunit 1, humanhuman

Known RBP eCLIP

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1P35269 ZNF131-209ENST00000507393 583 ntTSL 49.12□□□□□ -0.951e-6■□□□□ 11.3
GTF2F1P35269 ZNF131-207ENST00000507218 1352 ntTSL 1 (best)8.86□□□□□ -0.991e-6■□□□□ 11.3
GTF2F1P35269 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.251e-6■□□□□ 11.3
GTF2F1P35269 ZNF131-210ENST00000508259 501 ntTSL 53.74□□□□□ -1.811e-6■□□□□ 11.3
GTF2F1P35269 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.48e-16■□□□□ 11.3
GTF2F1P35269 MCL1-204ENST00000620947 3626 ntTSL 1 (best) BASIC14.89□□□□□ -0.038e-16■□□□□ 11.3
GTF2F1P35269 PDIA3-202ENST00000434494 2107 ntTSL 216.36■□□□□ 0.219e-14■□□□□ 11.3
GTF2F1P35269 PDIA3-201ENST00000300289 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.459e-14■□□□□ 11.3
GTF2F1P35269 PDIA3-206ENST00000497349 739 ntTSL 28.07□□□□□ -1.129e-14■□□□□ 11.3
GTF2F1P35269 PHF1-208ENST00000486845 1099 ntTSL 522.95■■□□□ 1.261e-7■□□□□ 11.3
GTF2F1P35269 PHF1-209ENST00000487667 1930 ntTSL 522.39■■□□□ 1.171e-7■□□□□ 11.3
GTF2F1P35269 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC21.29■■□□□ 11e-7■□□□□ 11.3
GTF2F1P35269 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.81e-7■□□□□ 11.3
GTF2F1P35269 PHF1-211ENST00000495509 1752 ntTSL 216.38■□□□□ 0.211e-7■□□□□ 11.3
GTF2F1P35269 ARHGEF1-207ENST00000594258 919 ntTSL 321.86■■□□□ 1.093e-8■□□□□ 11.3
GTF2F1P35269 ARHGEF1-213ENST00000595897 2973 ntTSL 1 (best)20.75■□□□□ 0.913e-8■□□□□ 11.3
GTF2F1P35269 TCF25-221ENST00000568409 857 ntTSL 314.79□□□□□ -0.047e-10■□□□□ 11.3
GTF2F1P35269 TCF25-223ENST00000568870 263 ntTSL 214.79□□□□□ -0.047e-10■□□□□ 11.3
GTF2F1P35269 TCF25-219ENST00000566751 383 ntTSL 59.09□□□□□ -0.957e-10■□□□□ 11.3
GTF2F1P35269 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC32.37■■■□□ 2.779e-7■□□□□ 11.3
GTF2F1P35269 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC32.37■■■□□ 2.779e-7■□□□□ 11.3
GTF2F1P35269 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.189e-7■□□□□ 11.3
GTF2F1P35269 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.489e-10■□□□□ 11.3
GTF2F1P35269 RPL8-203ENST00000525232 1007 ntTSL 1 (best)23.77■■□□□ 1.49e-10■□□□□ 11.3
GTF2F1P35269 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.61■□□□□ 0.899e-10■□□□□ 11.3
GTF2F1P35269 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.739e-10■□□□□ 11.3
GTF2F1P35269 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.2■□□□□ 0.669e-10■□□□□ 11.3
GTF2F1P35269 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.649e-10■□□□□ 11.3
GTF2F1P35269 RPL8-206ENST00000528296 540 ntTSL 318.91■□□□□ 0.629e-10■□□□□ 11.3
GTF2F1P35269 RPL8-209ENST00000529920 876 ntTSL 218.53■□□□□ 0.569e-10■□□□□ 11.3
GTF2F1P35269 RPL8-213ENST00000533397 730 ntTSL 218.32■□□□□ 0.529e-10■□□□□ 11.3
GTF2F1P35269 RPL8-204ENST00000526668 717 ntTSL 1 (best)17.32■□□□□ 0.369e-10■□□□□ 11.3
GTF2F1P35269 RPL8-210ENST00000531767 570 ntTSL 517.31■□□□□ 0.369e-10■□□□□ 11.3
GTF2F1P35269 RPL8-212ENST00000532702 745 ntTSL 216.99■□□□□ 0.319e-10■□□□□ 11.3
GTF2F1P35269 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.74■□□□□ 0.279e-10■□□□□ 11.3
GTF2F1P35269 C22orf39-202ENST00000399562 3350 ntTSL 1 (best) BASIC14.7□□□□□ -0.069e-10■□□□□ 11.3
GTF2F1P35269 RPL8-211ENST00000531975 698 ntTSL 314.06□□□□□ -0.169e-10■□□□□ 11.3
GTF2F1P35269 RPL8-208ENST00000529163 556 ntTSL 212.92□□□□□ -0.349e-10■□□□□ 11.3
GTF2F1P35269 CTDNEP1-202ENST00000570380 506 ntTSL 512.34□□□□□ -0.439e-10■□□□□ 11.3
GTF2F1P35269 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC26.1■■□□□ 1.772e-15■□□□□ 11.2
GTF2F1P35269 SLC22A31-204ENST00000568161 651 ntTSL 316.03■□□□□ 0.162e-15■□□□□ 11.2
GTF2F1P35269 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.134e-53■□□□□ 11.2
GTF2F1P35269 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC24.65■■□□□ 1.541e-9■□□□□ 11.2
GTF2F1P35269 EEF1D-210ENST00000525223 610 ntTSL 315.12■□□□□ 0.015e-17■□□□□ 11.2
GTF2F1P35269 EEF1D-234ENST00000530616 749 ntTSL 315.09■□□□□ 0.015e-17■□□□□ 11.2
GTF2F1P35269 IGF2BP1-204ENST00000505562 461 ntTSL 317.31■□□□□ 0.365e-6■□□□□ 11.2
GTF2F1P35269 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC23.32■■□□□ 1.321e-10■□□□□ 11.2
GTF2F1P35269 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC19.61■□□□□ 0.731e-10■□□□□ 11.2
GTF2F1P35269 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.671e-10■□□□□ 11.2
GTF2F1P35269 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC18.79■□□□□ 0.61e-10■□□□□ 11.2
GTF2F1P35269 CIRBP-205ENST00000585913 833 ntTSL 324.1■■□□□ 1.452e-6■□□□□ 11.1
GTF2F1P35269 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC23.77■■□□□ 1.42e-6■□□□□ 11.1
GTF2F1P35269 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC22.61■■□□□ 1.212e-6■□□□□ 11.1
GTF2F1P35269 CIRBP-210ENST00000586636 938 ntTSL 220.7■□□□□ 0.92e-6■□□□□ 11.1
GTF2F1P35269 CIRBP-232ENST00000591376 830 ntTSL 320.7■□□□□ 0.92e-6■□□□□ 11.1
GTF2F1P35269 CIRBP-212ENST00000587169 3028 ntTSL 219.97■□□□□ 0.792e-6■□□□□ 11.1
GTF2F1P35269 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.45■□□□□ 0.72e-6■□□□□ 11.1
GTF2F1P35269 CIRBP-206ENST00000585914 1052 ntTSL 519.38■□□□□ 0.692e-6■□□□□ 11.1
GTF2F1P35269 CIRBP-228ENST00000590347 3117 ntTSL 218.45■□□□□ 0.542e-6■□□□□ 11.1
GTF2F1P35269 CIRBP-242ENST00000593093 3528 ntTSL 216.86■□□□□ 0.292e-6■□□□□ 11.1
GTF2F1P35269 SPPL2B-204ENST00000587851 586 ntTSL 323.73■■□□□ 1.392e-6■□□□□ 11.1
GTF2F1P35269 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.761e-41■□□□□ 11.1
GTF2F1P35269 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.721e-41■□□□□ 11.1
GTF2F1P35269 AJUBA-205ENST00000553736 751 ntTSL 222.68■■□□□ 1.222e-7■□□□□ 11.1
GTF2F1P35269 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC22.6■■□□□ 1.212e-7■□□□□ 11.1
GTF2F1P35269 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.49■□□□□ 0.712e-7■□□□□ 11.1
GTF2F1P35269 MINK1-204ENST00000571207 4569 ntTSL 517.98■□□□□ 0.472e-7■□□□□ 11.1
GTF2F1P35269 SEC23A-214ENST00000557437 575 ntTSL 416.68■□□□□ 0.262e-7■□□□□ 11.1
GTF2F1P35269 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC16.03■□□□□ 0.162e-7■□□□□ 11.1
GTF2F1P35269 SEC23A-212ENST00000556092 571 ntTSL 415.9■□□□□ 0.142e-7■□□□□ 11.1
GTF2F1P35269 MINK1-206ENST00000572304 559 ntTSL 415.66■□□□□ 0.12e-7■□□□□ 11.1
GTF2F1P35269 MINK1-205ENST00000571526 552 ntTSL 414.09□□□□□ -0.152e-7■□□□□ 11.1
GTF2F1P35269 SEC23A-210ENST00000555425 547 ntTSL 55.22□□□□□ -1.572e-7■□□□□ 11.1
GTF2F1P35269 SEC23A-208ENST00000555017 588 ntTSL 43.64□□□□□ -1.832e-7■□□□□ 11.1
GTF2F1P35269 ZFAS1-207ENST00000458653 596 ntTSL 231.1■■■□□ 2.574e-8■□□□□ 11.1
GTF2F1P35269 ZFAS1-202ENST00000371743 1008 ntTSL 1 (best)28.1■■■□□ 2.094e-8■□□□□ 11.1
GTF2F1P35269 ZFAS1-203ENST00000417721 860 ntTSL 1 (best)27.45■■□□□ 1.984e-8■□□□□ 11.1
GTF2F1P35269 ZFAS1-205ENST00000441722 946 ntTSL 1 (best)23.64■■□□□ 1.374e-8■□□□□ 11.1
GTF2F1P35269 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC23.64■■□□□ 1.374e-8■□□□□ 11.1
GTF2F1P35269 ZFAS1-209ENST00000620594 508 ntTSL 38.76□□□□□ -1.014e-8■□□□□ 11.1
GTF2F1P35269 ZFAS1-201ENST00000326677 504 ntTSL 1 (best)8.49□□□□□ -1.054e-8■□□□□ 11.1
GTF2F1P35269 ZFAS1-204ENST00000428008 566 ntTSL 28.49□□□□□ -1.054e-8■□□□□ 11.1
GTF2F1P35269 CBX5-206ENST00000618078 2627 ntTSL 216.9■□□□□ 0.32e-8■□□□□ 11.1
GTF2F1P35269 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.372e-8■□□□□ 11.1
GTF2F1P35269 ANKRD28-203ENST00000439830 592 ntTSL 528.35■■■□□ 2.134e-6■□□□□ 11.1
GTF2F1P35269 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.122e-6■□□□□ 11.1
GTF2F1P35269 AURKAIP1-205ENST00000489799 695 ntTSL 1 (best)26.06■■□□□ 1.762e-6■□□□□ 11.1
GTF2F1P35269 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.382e-6■□□□□ 11.1
GTF2F1P35269 AURKAIP1-206ENST00000496905 608 ntTSL 220.75■□□□□ 0.912e-6■□□□□ 11.1
GTF2F1P35269 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.812e-6■□□□□ 11.1
GTF2F1P35269 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.382e-6■□□□□ 11.1
GTF2F1P35269 FTX-211ENST00000603672 1077 ntTSL 514.87□□□□□ -0.032e-10■□□□□ 11.1
GTF2F1P35269 FTX-218ENST00000641360 3897 nt5.35□□□□□ -1.552e-10■□□□□ 11.1
GTF2F1P35269 CA5A-203ENST00000568801 506 ntTSL 210.99□□□□□ -0.653e-8■□□□□ 11.1
GTF2F1P35269 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.3■□□□□ 0.685e-9■□□□□ 11
GTF2F1P35269 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.595e-9■□□□□ 11
GTF2F1P35269 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.45e-9■□□□□ 11
GTF2F1P35269 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.295e-9■□□□□ 11
GTF2F1P35269 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.723e-6■□□□□ 11
GTF2F1P35269 PPT2-EGFL8-207ENST00000585246 1051 ntAPPRIS ALT2 TSL 223.79■■□□□ 1.43e-6■□□□□ 11
Retrieved 100 of 18,214 protein–RNA pairs in 83.2 ms