Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN7P35236 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN7P35236 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
PTPN7P35236 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PTPN7P35236 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PTPN7P35236 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.31■□□□□ 0.36
PTPN7P35236 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.3■□□□□ 0.36
PTPN7P35236 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.3■□□□□ 0.36
PTPN7P35236 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.3■□□□□ 0.36
PTPN7P35236 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN7P35236 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN7P35236 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN7P35236 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.3■□□□□ 0.36
PTPN7P35236 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC17.3■□□□□ 0.36
PTPN7P35236 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN7P35236 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
PTPN7P35236 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.3■□□□□ 0.36
PTPN7P35236 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN7P35236 RPS2P1-201ENST00000434010 821 ntBASIC17.3■□□□□ 0.36
PTPN7P35236 DUSP5P1-201ENST00000441325 1139 ntBASIC17.3■□□□□ 0.36
PTPN7P35236 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.3■□□□□ 0.36
PTPN7P35236 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.3■□□□□ 0.36
PTPN7P35236 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.3■□□□□ 0.36
PTPN7P35236 CLEC4GP1-201ENST00000596555 870 ntBASIC17.3■□□□□ 0.36
PTPN7P35236 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PTPN7P35236 AC008735.5-201ENST00000623544 497 ntBASIC17.3■□□□□ 0.36
PTPN7P35236 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN7P35236 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN7P35236 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.3■□□□□ 0.36
PTPN7P35236 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PTPN7P35236 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.3■□□□□ 0.36
PTPN7P35236 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.3■□□□□ 0.36
PTPN7P35236 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN7P35236 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN7P35236 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
PTPN7P35236 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN7P35236 AL365203.3-201ENST00000609742 2057 ntBASIC17.3■□□□□ 0.36
PTPN7P35236 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.3■□□□□ 0.36
PTPN7P35236 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PTPN7P35236 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN7P35236 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN7P35236 AL596087.1-201ENST00000400979 1969 ntBASIC17.29■□□□□ 0.36
PTPN7P35236 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.29■□□□□ 0.36
PTPN7P35236 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN7P35236 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PTPN7P35236 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN7P35236 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN7P35236 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN7P35236 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN7P35236 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN7P35236 PCGF3-213ENST00000620529 1899 ntBASIC17.29■□□□□ 0.36
PTPN7P35236 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN7P35236 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.29■□□□□ 0.36
PTPN7P35236 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN7P35236 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN7P35236 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN7P35236 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN7P35236 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN7P35236 AC073648.2-201ENST00000510116 352 ntBASIC17.29■□□□□ 0.36
PTPN7P35236 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.29■□□□□ 0.36
PTPN7P35236 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
PTPN7P35236 AC010654.1-201ENST00000615722 808 ntBASIC17.29■□□□□ 0.36
PTPN7P35236 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
PTPN7P35236 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN7P35236 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN7P35236 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN7P35236 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN7P35236 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN7P35236 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PTPN7P35236 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN7P35236 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
PTPN7P35236 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.29■□□□□ 0.36
PTPN7P35236 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN7P35236 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN7P35236 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.29■□□□□ 0.36
PTPN7P35236 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN7P35236 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PTPN7P35236 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN7P35236 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.28■□□□□ 0.36
PTPN7P35236 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN7P35236 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.28■□□□□ 0.36
PTPN7P35236 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PTPN7P35236 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN7P35236 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN7P35236 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.28■□□□□ 0.36
PTPN7P35236 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PTPN7P35236 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN7P35236 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
PTPN7P35236 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.28■□□□□ 0.36
PTPN7P35236 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN7P35236 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.28■□□□□ 0.36
PTPN7P35236 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.28■□□□□ 0.36
PTPN7P35236 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.28■□□□□ 0.36
PTPN7P35236 AC018712.1-201ENST00000455767 687 ntBASIC17.28■□□□□ 0.36
PTPN7P35236 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN7P35236 AC012313.10-201ENST00000623509 926 ntBASIC17.28■□□□□ 0.36
PTPN7P35236 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN7P35236 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN7P35236 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN7P35236 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms