Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CNGA1P29973 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19■□□□□ 0.63
CNGA1P29973 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CNGA1P29973 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CNGA1P29973 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNGA1P29973 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.99■□□□□ 0.63
CNGA1P29973 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNGA1P29973 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CNGA1P29973 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNGA1P29973 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CNGA1P29973 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CNGA1P29973 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNGA1P29973 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNGA1P29973 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNGA1P29973 MIR346-201ENST00000362234 95 ntBASIC18.99■□□□□ 0.63
CNGA1P29973 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNGA1P29973 RNU1-129P-201ENST00000384064 167 ntBASIC18.99■□□□□ 0.63
CNGA1P29973 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.99■□□□□ 0.63
CNGA1P29973 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNGA1P29973 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.99■□□□□ 0.63
CNGA1P29973 RN7SL692P-201ENST00000464677 288 ntBASIC18.99■□□□□ 0.63
CNGA1P29973 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CNGA1P29973 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.99■□□□□ 0.63
CNGA1P29973 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.99■□□□□ 0.63
CNGA1P29973 CR383656.12-201ENST00000549567 513 ntBASIC18.99■□□□□ 0.63
CNGA1P29973 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.99■□□□□ 0.63
CNGA1P29973 AL596325.1-201ENST00000563991 1082 ntBASIC18.99■□□□□ 0.63
CNGA1P29973 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CNGA1P29973 U1.21-201ENST00000580816 167 ntBASIC18.99■□□□□ 0.63
CNGA1P29973 AC003101.2-201ENST00000612557 442 ntBASIC18.99■□□□□ 0.63
CNGA1P29973 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.99■□□□□ 0.63
CNGA1P29973 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.99■□□□□ 0.63
CNGA1P29973 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNGA1P29973 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
CNGA1P29973 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.99■□□□□ 0.63
CNGA1P29973 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.99■□□□□ 0.63
CNGA1P29973 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CNGA1P29973 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNGA1P29973 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CNGA1P29973 AC100757.3-201ENST00000622361 1406 ntBASIC18.99■□□□□ 0.63
CNGA1P29973 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CNGA1P29973 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CNGA1P29973 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CNGA1P29973 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CNGA1P29973 AC016027.1-202ENST00000607927 1699 ntBASIC18.98■□□□□ 0.63
CNGA1P29973 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.98■□□□□ 0.63
CNGA1P29973 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNGA1P29973 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.98■□□□□ 0.63
CNGA1P29973 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.98■□□□□ 0.63
CNGA1P29973 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNGA1P29973 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CNGA1P29973 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CNGA1P29973 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CNGA1P29973 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNGA1P29973 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNGA1P29973 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CNGA1P29973 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CNGA1P29973 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNGA1P29973 MRPS18AP1-201ENST00000414458 589 ntBASIC18.98■□□□□ 0.63
CNGA1P29973 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.98■□□□□ 0.63
CNGA1P29973 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.98■□□□□ 0.63
CNGA1P29973 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.98■□□□□ 0.63
CNGA1P29973 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CNGA1P29973 MEIS3P1-201ENST00000495167 958 ntBASIC18.98■□□□□ 0.63
CNGA1P29973 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNGA1P29973 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CNGA1P29973 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.98■□□□□ 0.63
CNGA1P29973 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.98■□□□□ 0.63
CNGA1P29973 AL590560.3-201ENST00000623350 461 ntBASIC18.98■□□□□ 0.63
CNGA1P29973 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
CNGA1P29973 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.98■□□□□ 0.63
CNGA1P29973 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.98■□□□□ 0.63
CNGA1P29973 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CNGA1P29973 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNGA1P29973 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNGA1P29973 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CNGA1P29973 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CNGA1P29973 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
CNGA1P29973 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CNGA1P29973 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.97■□□□□ 0.63
CNGA1P29973 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNGA1P29973 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNGA1P29973 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.97■□□□□ 0.63
CNGA1P29973 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNGA1P29973 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNGA1P29973 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNGA1P29973 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CNGA1P29973 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNGA1P29973 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNGA1P29973 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.97■□□□□ 0.63
CNGA1P29973 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.97■□□□□ 0.63
CNGA1P29973 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
CNGA1P29973 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.97■□□□□ 0.63
CNGA1P29973 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.97■□□□□ 0.63
CNGA1P29973 AL359881.2-201ENST00000602973 570 ntBASIC18.97■□□□□ 0.63
CNGA1P29973 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.97■□□□□ 0.63
CNGA1P29973 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CNGA1P29973 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CNGA1P29973 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CNGA1P29973 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms