Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 ARL16-211ENST00000576135 694 ntTSL 3 BASIC15.61■□□□□ 0.09
TNFRSF1BP20333 TERC-201ENST00000602385 541 ntBASIC15.61■□□□□ 0.09
TNFRSF1BP20333 AC064862.7-201ENST00000604520 867 ntBASIC15.61■□□□□ 0.09
TNFRSF1BP20333 AL353135.1-201ENST00000606729 504 ntBASIC15.61■□□□□ 0.09
TNFRSF1BP20333 NPAP1P7-201ENST00000613027 823 ntBASIC15.61■□□□□ 0.09
TNFRSF1BP20333 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.61■□□□□ 0.09
TNFRSF1BP20333 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TNFRSF1BP20333 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TNFRSF1BP20333 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TNFRSF1BP20333 TSPY26P-202ENST00000565928 3884 ntBASIC15.61■□□□□ 0.09
TNFRSF1BP20333 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TNFRSF1BP20333 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.61■□□□□ 0.09
TNFRSF1BP20333 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TNFRSF1BP20333 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TNFRSF1BP20333 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.61■□□□□ 0.09
TNFRSF1BP20333 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.61■□□□□ 0.09
TNFRSF1BP20333 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TNFRSF1BP20333 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TNFRSF1BP20333 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TNFRSF1BP20333 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.61■□□□□ 0.09
TNFRSF1BP20333 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.61■□□□□ 0.09
TNFRSF1BP20333 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TNFRSF1BP20333 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.61■□□□□ 0.09
TNFRSF1BP20333 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TNFRSF1BP20333 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TNFRSF1BP20333 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TNFRSF1BP20333 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TNFRSF1BP20333 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.6■□□□□ 0.09
TNFRSF1BP20333 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.6■□□□□ 0.09
TNFRSF1BP20333 AC105917.1-201ENST00000506637 2539 ntBASIC15.6■□□□□ 0.09
TNFRSF1BP20333 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TNFRSF1BP20333 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TNFRSF1BP20333 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TNFRSF1BP20333 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TNFRSF1BP20333 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.6■□□□□ 0.09
TNFRSF1BP20333 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TNFRSF1BP20333 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.6■□□□□ 0.09
TNFRSF1BP20333 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.6■□□□□ 0.09
TNFRSF1BP20333 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
TNFRSF1BP20333 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.6■□□□□ 0.09
TNFRSF1BP20333 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.6■□□□□ 0.09
TNFRSF1BP20333 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.6■□□□□ 0.09
TNFRSF1BP20333 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TNFRSF1BP20333 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.6■□□□□ 0.09
TNFRSF1BP20333 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.6■□□□□ 0.09
TNFRSF1BP20333 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TNFRSF1BP20333 AC138894.3-201ENST00000603787 634 ntBASIC15.6■□□□□ 0.09
TNFRSF1BP20333 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
TNFRSF1BP20333 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TNFRSF1BP20333 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.6■□□□□ 0.09
TNFRSF1BP20333 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.6■□□□□ 0.09
TNFRSF1BP20333 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TNFRSF1BP20333 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TNFRSF1BP20333 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TNFRSF1BP20333 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.6■□□□□ 0.09
TNFRSF1BP20333 AC011270.2-201ENST00000624293 2550 ntBASIC15.6■□□□□ 0.09
TNFRSF1BP20333 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.6■□□□□ 0.09
TNFRSF1BP20333 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TNFRSF1BP20333 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TNFRSF1BP20333 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TNFRSF1BP20333 AL596257.1-201ENST00000641463 2694 ntBASIC15.6■□□□□ 0.09
TNFRSF1BP20333 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TNFRSF1BP20333 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.6■□□□□ 0.09
TNFRSF1BP20333 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TNFRSF1BP20333 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.59■□□□□ 0.09
TNFRSF1BP20333 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TNFRSF1BP20333 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TNFRSF1BP20333 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TNFRSF1BP20333 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TNFRSF1BP20333 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.59■□□□□ 0.09
TNFRSF1BP20333 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.59■□□□□ 0.09
TNFRSF1BP20333 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TNFRSF1BP20333 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
TNFRSF1BP20333 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TNFRSF1BP20333 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TNFRSF1BP20333 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TNFRSF1BP20333 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.59■□□□□ 0.09
TNFRSF1BP20333 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
TNFRSF1BP20333 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.59■□□□□ 0.09
TNFRSF1BP20333 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TNFRSF1BP20333 MTHFR-217ENST00000641820 1569 ntBASIC15.59■□□□□ 0.09
TNFRSF1BP20333 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TNFRSF1BP20333 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TNFRSF1BP20333 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TNFRSF1BP20333 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TNFRSF1BP20333 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.59■□□□□ 0.09
TNFRSF1BP20333 AC012615.1-201ENST00000565797 1299 ntBASIC15.59■□□□□ 0.09
TNFRSF1BP20333 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.59■□□□□ 0.09
TNFRSF1BP20333 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.59■□□□□ 0.09
TNFRSF1BP20333 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.59■□□□□ 0.09
TNFRSF1BP20333 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.59■□□□□ 0.09
TNFRSF1BP20333 AL591684.3-201ENST00000605187 298 ntBASIC15.59■□□□□ 0.09
TNFRSF1BP20333 AC010331.1-201ENST00000611423 582 ntBASIC15.59■□□□□ 0.09
TNFRSF1BP20333 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC15.59■□□□□ 0.09
TNFRSF1BP20333 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TNFRSF1BP20333 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TNFRSF1BP20333 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TNFRSF1BP20333 SNX33P1-201ENST00000592116 1762 ntBASIC15.59■□□□□ 0.09
TNFRSF1BP20333 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TNFRSF1BP20333 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms