Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.82■□□□□ 0.28
CTPS1P17812 MCCD1P2-201ENST00000423228 335 ntBASIC16.82■□□□□ 0.28
CTPS1P17812 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.82■□□□□ 0.28
CTPS1P17812 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.82■□□□□ 0.28
CTPS1P17812 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.82■□□□□ 0.28
CTPS1P17812 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.82■□□□□ 0.28
CTPS1P17812 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTPS1P17812 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTPS1P17812 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTPS1P17812 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.82■□□□□ 0.28
CTPS1P17812 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CTPS1P17812 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTPS1P17812 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTPS1P17812 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CTPS1P17812 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTPS1P17812 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTPS1P17812 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.82■□□□□ 0.28
CTPS1P17812 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTPS1P17812 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTPS1P17812 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTPS1P17812 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTPS1P17812 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CTPS1P17812 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CTPS1P17812 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.81■□□□□ 0.28
CTPS1P17812 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTPS1P17812 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
CTPS1P17812 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTPS1P17812 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CTPS1P17812 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTPS1P17812 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.81■□□□□ 0.28
CTPS1P17812 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTPS1P17812 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CTPS1P17812 RNU1-129P-201ENST00000384064 167 ntBASIC16.81■□□□□ 0.28
CTPS1P17812 FAM58CP-201ENST00000435741 640 ntBASIC16.81■□□□□ 0.28
CTPS1P17812 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.81■□□□□ 0.28
CTPS1P17812 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CTPS1P17812 ALG1L5P-201ENST00000482043 771 ntBASIC16.81■□□□□ 0.28
CTPS1P17812 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.81■□□□□ 0.28
CTPS1P17812 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.81■□□□□ 0.28
CTPS1P17812 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.81■□□□□ 0.28
CTPS1P17812 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.81■□□□□ 0.28
CTPS1P17812 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CTPS1P17812 AP002472.1-201ENST00000577490 586 ntBASIC16.81■□□□□ 0.28
CTPS1P17812 U1.21-201ENST00000580816 167 ntBASIC16.81■□□□□ 0.28
CTPS1P17812 MTDHP5-201ENST00000598980 586 ntBASIC16.81■□□□□ 0.28
CTPS1P17812 AL031055.1-201ENST00000606362 631 ntBASIC16.81■□□□□ 0.28
CTPS1P17812 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.81■□□□□ 0.28
CTPS1P17812 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.81■□□□□ 0.28
CTPS1P17812 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTPS1P17812 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTPS1P17812 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTPS1P17812 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CTPS1P17812 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CTPS1P17812 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CTPS1P17812 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.81■□□□□ 0.28
CTPS1P17812 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTPS1P17812 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CTPS1P17812 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTPS1P17812 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTPS1P17812 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTPS1P17812 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTPS1P17812 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTPS1P17812 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTPS1P17812 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTPS1P17812 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CTPS1P17812 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.8■□□□□ 0.28
CTPS1P17812 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.8■□□□□ 0.28
CTPS1P17812 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
CTPS1P17812 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTPS1P17812 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTPS1P17812 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTPS1P17812 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTPS1P17812 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.8■□□□□ 0.28
CTPS1P17812 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.8■□□□□ 0.28
CTPS1P17812 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.8■□□□□ 0.28
CTPS1P17812 AC140658.5-201ENST00000438532 169 ntBASIC16.8■□□□□ 0.28
CTPS1P17812 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.8■□□□□ 0.28
CTPS1P17812 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.8■□□□□ 0.28
CTPS1P17812 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTPS1P17812 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.8■□□□□ 0.28
CTPS1P17812 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.8■□□□□ 0.28
CTPS1P17812 AC023511.2-201ENST00000618803 211 ntBASIC16.8■□□□□ 0.28
CTPS1P17812 AC091812.2-201ENST00000619081 385 ntBASIC16.8■□□□□ 0.28
CTPS1P17812 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.8■□□□□ 0.28
CTPS1P17812 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.8■□□□□ 0.28
CTPS1P17812 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTPS1P17812 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTPS1P17812 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.8■□□□□ 0.28
CTPS1P17812 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.8■□□□□ 0.28
CTPS1P17812 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTPS1P17812 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.8■□□□□ 0.28
CTPS1P17812 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTPS1P17812 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTPS1P17812 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTPS1P17812 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTPS1P17812 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTPS1P17812 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.79■□□□□ 0.28
CTPS1P17812 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTPS1P17812 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTPS1P17812 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms