Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DOBP13765 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HLA-DOBP13765 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.03■□□□□ -0
HLA-DOBP13765 AC006538.1-201ENST00000567905 1585 ntBASIC15.02■□□□□ -0
HLA-DOBP13765 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.02■□□□□ -0
HLA-DOBP13765 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DOBP13765 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DOBP13765 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DOBP13765 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.02■□□□□ -0
HLA-DOBP13765 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DOBP13765 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DOBP13765 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
HLA-DOBP13765 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.02■□□□□ -0
HLA-DOBP13765 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DOBP13765 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.02■□□□□ -0
HLA-DOBP13765 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.02■□□□□ -0
HLA-DOBP13765 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.02■□□□□ -0
HLA-DOBP13765 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.02■□□□□ -0
HLA-DOBP13765 AC005052.1-201ENST00000625181 2492 ntBASIC15.02■□□□□ -0
HLA-DOBP13765 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DOBP13765 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.02■□□□□ -0
HLA-DOBP13765 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.02■□□□□ -0
HLA-DOBP13765 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HLA-DOBP13765 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.02■□□□□ -0
HLA-DOBP13765 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.02■□□□□ -0
HLA-DOBP13765 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.02■□□□□ -0
HLA-DOBP13765 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.02■□□□□ -0
HLA-DOBP13765 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.02■□□□□ -0
HLA-DOBP13765 AC009947.1-201ENST00000444350 727 ntBASIC15.02■□□□□ -0
HLA-DOBP13765 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.02■□□□□ -0
HLA-DOBP13765 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.02■□□□□ -0
HLA-DOBP13765 IGHV3-22-201ENST00000520721 359 ntBASIC15.02■□□□□ -0
HLA-DOBP13765 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.02■□□□□ -0
HLA-DOBP13765 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.02■□□□□ -0
HLA-DOBP13765 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.02■□□□□ -0
HLA-DOBP13765 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.02■□□□□ -0
HLA-DOBP13765 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.02■□□□□ -0
HLA-DOBP13765 MIR4751-201ENST00000578027 74 ntBASIC15.02■□□□□ -0
HLA-DOBP13765 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.02■□□□□ -0
HLA-DOBP13765 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.02■□□□□ -0
HLA-DOBP13765 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DOBP13765 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DOBP13765 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
HLA-DOBP13765 AC092364.2-201ENST00000596710 2692 ntBASIC15.02□□□□□ -0.01
HLA-DOBP13765 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DOBP13765 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DOBP13765 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DOBP13765 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DOBP13765 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DOBP13765 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
HLA-DOBP13765 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.02□□□□□ -0.01
HLA-DOBP13765 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
HLA-DOBP13765 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DOBP13765 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DOBP13765 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DOBP13765 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DOBP13765 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DOBP13765 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DOBP13765 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DOBP13765 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-DOBP13765 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DOBP13765 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DOBP13765 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
HLA-DOBP13765 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
HLA-DOBP13765 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DOBP13765 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DOBP13765 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
HLA-DOBP13765 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DOBP13765 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.01□□□□□ -0.01
HLA-DOBP13765 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
HLA-DOBP13765 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-DOBP13765 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
HLA-DOBP13765 AC079776.4-201ENST00000511039 504 ntBASIC15.01□□□□□ -0.01
HLA-DOBP13765 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.01□□□□□ -0.01
HLA-DOBP13765 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
HLA-DOBP13765 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-DOBP13765 AC091167.2-201ENST00000579581 588 ntBASIC15.01□□□□□ -0.01
HLA-DOBP13765 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DOBP13765 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DOBP13765 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.01□□□□□ -0.01
HLA-DOBP13765 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.01□□□□□ -0.01
HLA-DOBP13765 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DOBP13765 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.01□□□□□ -0.01
HLA-DOBP13765 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
HLA-DOBP13765 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DOBP13765 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
HLA-DOBP13765 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.01□□□□□ -0.01
HLA-DOBP13765 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DOBP13765 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DOBP13765 AL353732.1-201ENST00000569618 1459 ntBASIC15.01□□□□□ -0.01
HLA-DOBP13765 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.01□□□□□ -0.01
HLA-DOBP13765 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DOBP13765 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
HLA-DOBP13765 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.01□□□□□ -0.01
HLA-DOBP13765 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15□□□□□ -0.01
HLA-DOBP13765 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DOBP13765 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
HLA-DOBP13765 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15□□□□□ -0.01
HLA-DOBP13765 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15□□□□□ -0.01
HLA-DOBP13765 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms