Protein–RNA interactions for Protein: P0DP09

IGKV1-13, Immunoglobulin kappa variable 1-13, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1-13P0DP09 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC13.86□□□□□ -0.19
IGKV1-13P0DP09 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
IGKV1-13P0DP09 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
IGKV1-13P0DP09 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
IGKV1-13P0DP09 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC13.86□□□□□ -0.19
IGKV1-13P0DP09 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
IGKV1-13P0DP09 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC13.86□□□□□ -0.19
IGKV1-13P0DP09 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
IGKV1-13P0DP09 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IGKV1-13P0DP09 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC13.86□□□□□ -0.19
IGKV1-13P0DP09 AC012615.1-201ENST00000565797 1299 ntBASIC13.86□□□□□ -0.19
IGKV1-13P0DP09 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC13.86□□□□□ -0.19
IGKV1-13P0DP09 AC064862.7-201ENST00000604520 867 ntBASIC13.86□□□□□ -0.19
IGKV1-13P0DP09 AP001269.4-201ENST00000609611 512 ntBASIC13.86□□□□□ -0.19
IGKV1-13P0DP09 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IGKV1-13P0DP09 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
IGKV1-13P0DP09 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IGKV1-13P0DP09 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IGKV1-13P0DP09 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
IGKV1-13P0DP09 AL512652.2-201ENST00000625156 1716 ntBASIC13.86□□□□□ -0.19
IGKV1-13P0DP09 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
IGKV1-13P0DP09 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IGKV1-13P0DP09 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IGKV1-13P0DP09 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
IGKV1-13P0DP09 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IGKV1-13P0DP09 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
IGKV1-13P0DP09 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
IGKV1-13P0DP09 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
IGKV1-13P0DP09 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.86□□□□□ -0.19
IGKV1-13P0DP09 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
IGKV1-13P0DP09 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
IGKV1-13P0DP09 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
IGKV1-13P0DP09 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IGKV1-13P0DP09 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IGKV1-13P0DP09 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IGKV1-13P0DP09 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 TOP3BP1-201ENST00000420768 1380 ntBASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 AP005117.1-201ENST00000584346 1413 ntBASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 DBP-204ENST00000599385 709 ntTSL 3 BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 NPAP1P7-201ENST00000613027 823 ntBASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 BCL10-202ENST00000620248 774 ntTSL 5 BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 MYB-201ENST00000316528 3571 ntTSL 5 BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
IGKV1-13P0DP09 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.84□□□□□ -0.19
IGKV1-13P0DP09 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
IGKV1-13P0DP09 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
IGKV1-13P0DP09 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
IGKV1-13P0DP09 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC13.84□□□□□ -0.19
IGKV1-13P0DP09 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
IGKV1-13P0DP09 AL031731.1-201ENST00000642131 2094 ntBASIC13.84□□□□□ -0.19
IGKV1-13P0DP09 AC010491.1-201ENST00000563101 2797 ntBASIC13.84□□□□□ -0.19
IGKV1-13P0DP09 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.84□□□□□ -0.19
IGKV1-13P0DP09 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
IGKV1-13P0DP09 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
IGKV1-13P0DP09 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms