Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD48P09326 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.35■□□□□ 0.37
CD48P09326 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD48P09326 AC009947.1-201ENST00000444350 727 ntBASIC17.35■□□□□ 0.37
CD48P09326 IGHV3-22-201ENST00000520721 359 ntBASIC17.35■□□□□ 0.37
CD48P09326 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
CD48P09326 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CD48P09326 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.35■□□□□ 0.37
CD48P09326 AC005412.3-201ENST00000580309 715 ntBASIC17.35■□□□□ 0.37
CD48P09326 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD48P09326 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC17.35■□□□□ 0.37
CD48P09326 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.35■□□□□ 0.37
CD48P09326 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.35■□□□□ 0.37
CD48P09326 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.35■□□□□ 0.37
CD48P09326 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.35■□□□□ 0.37
CD48P09326 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.35■□□□□ 0.37
CD48P09326 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD48P09326 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD48P09326 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD48P09326 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD48P09326 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.35■□□□□ 0.37
CD48P09326 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CD48P09326 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CD48P09326 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD48P09326 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CD48P09326 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD48P09326 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.35■□□□□ 0.37
CD48P09326 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CD48P09326 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.35■□□□□ 0.37
CD48P09326 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD48P09326 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD48P09326 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD48P09326 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CD48P09326 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD48P09326 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD48P09326 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
CD48P09326 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD48P09326 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD48P09326 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CD48P09326 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD48P09326 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD48P09326 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CD48P09326 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.34■□□□□ 0.37
CD48P09326 RNA5SP415-201ENST00000517246 115 ntBASIC17.34■□□□□ 0.37
CD48P09326 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.34■□□□□ 0.37
CD48P09326 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.34■□□□□ 0.37
CD48P09326 AC087641.1-201ENST00000557561 1021 ntBASIC17.34■□□□□ 0.37
CD48P09326 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
CD48P09326 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.34■□□□□ 0.37
CD48P09326 MIR4751-201ENST00000578027 74 ntBASIC17.34■□□□□ 0.37
CD48P09326 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.34■□□□□ 0.37
CD48P09326 AC010654.1-201ENST00000615722 808 ntBASIC17.34■□□□□ 0.37
CD48P09326 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.34■□□□□ 0.37
CD48P09326 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD48P09326 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD48P09326 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD48P09326 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD48P09326 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CD48P09326 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD48P09326 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
CD48P09326 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD48P09326 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD48P09326 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
CD48P09326 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.33■□□□□ 0.37
CD48P09326 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
CD48P09326 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CD48P09326 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CD48P09326 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CD48P09326 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.33■□□□□ 0.37
CD48P09326 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CD48P09326 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC17.33■□□□□ 0.36
CD48P09326 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.33■□□□□ 0.36
CD48P09326 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CD48P09326 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.33■□□□□ 0.36
CD48P09326 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CD48P09326 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CD48P09326 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.33■□□□□ 0.36
CD48P09326 IGLL3P-201ENST00000412472 434 ntBASIC17.33■□□□□ 0.36
CD48P09326 TPM4P1-201ENST00000436100 807 ntBASIC17.33■□□□□ 0.36
CD48P09326 FAM185BP-201ENST00000443595 716 ntBASIC17.33■□□□□ 0.36
CD48P09326 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.33■□□□□ 0.36
CD48P09326 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.33■□□□□ 0.36
CD48P09326 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CD48P09326 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.33■□□□□ 0.36
CD48P09326 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.33■□□□□ 0.36
CD48P09326 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.33■□□□□ 0.36
CD48P09326 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CD48P09326 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.33■□□□□ 0.36
CD48P09326 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CD48P09326 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
CD48P09326 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CD48P09326 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CD48P09326 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CD48P09326 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CD48P09326 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CD48P09326 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CD48P09326 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
CD48P09326 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CD48P09326 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CD48P09326 AL162727.3-201ENST00000635661 2787 ntBASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms