Protein–RNA interactions for Protein: P05166

PCCB, Propionyl-CoA carboxylase beta chain, mitochondrial, humanhuman

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCCBP05166 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCCBP05166 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCCBP05166 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCCBP05166 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCCBP05166 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCCBP05166 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.55■□□□□ 0.24
PCCBP05166 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.55■□□□□ 0.24
PCCBP05166 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.55■□□□□ 0.24
PCCBP05166 KRT18P32-201ENST00000424695 1287 ntBASIC16.55■□□□□ 0.24
PCCBP05166 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.55■□□□□ 0.24
PCCBP05166 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.55■□□□□ 0.24
PCCBP05166 AC069335.1-201ENST00000489972 472 ntBASIC16.55■□□□□ 0.24
PCCBP05166 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.55■□□□□ 0.24
PCCBP05166 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCCBP05166 AC013467.2-201ENST00000605472 835 ntBASIC16.55■□□□□ 0.24
PCCBP05166 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCCBP05166 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PCCBP05166 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCCBP05166 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCCBP05166 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCCBP05166 LINC00895-201ENST00000629028 1637 ntBASIC16.55■□□□□ 0.24
PCCBP05166 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PCCBP05166 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCCBP05166 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
PCCBP05166 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCCBP05166 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCCBP05166 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCCBP05166 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCCBP05166 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCCBP05166 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCCBP05166 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCCBP05166 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCCBP05166 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.54■□□□□ 0.24
PCCBP05166 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCCBP05166 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCCBP05166 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCCBP05166 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCCBP05166 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.54■□□□□ 0.24
PCCBP05166 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.54■□□□□ 0.24
PCCBP05166 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.54■□□□□ 0.24
PCCBP05166 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCCBP05166 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCCBP05166 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.54■□□□□ 0.24
PCCBP05166 AC005915.1-201ENST00000624912 2018 ntBASIC16.54■□□□□ 0.24
PCCBP05166 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCCBP05166 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PCCBP05166 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.54■□□□□ 0.24
PCCBP05166 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.54■□□□□ 0.24
PCCBP05166 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCCBP05166 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCCBP05166 AC106028.4-201ENST00000614509 607 ntBASIC16.54■□□□□ 0.24
PCCBP05166 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCCBP05166 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCCBP05166 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCCBP05166 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.54■□□□□ 0.24
PCCBP05166 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.54■□□□□ 0.24
PCCBP05166 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PCCBP05166 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
PCCBP05166 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCCBP05166 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PCCBP05166 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PCCBP05166 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCCBP05166 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PCCBP05166 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCCBP05166 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCCBP05166 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCCBP05166 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
PCCBP05166 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.54■□□□□ 0.24
PCCBP05166 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.54■□□□□ 0.24
PCCBP05166 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PCCBP05166 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCCBP05166 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCCBP05166 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCCBP05166 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCCBP05166 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCCBP05166 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCCBP05166 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.53■□□□□ 0.24
PCCBP05166 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCCBP05166 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
PCCBP05166 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
PCCBP05166 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCCBP05166 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCCBP05166 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.53■□□□□ 0.24
PCCBP05166 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.53■□□□□ 0.24
PCCBP05166 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.53■□□□□ 0.24
PCCBP05166 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.53■□□□□ 0.24
PCCBP05166 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.53■□□□□ 0.24
PCCBP05166 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
PCCBP05166 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.53■□□□□ 0.24
PCCBP05166 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCCBP05166 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PCCBP05166 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.53■□□□□ 0.24
PCCBP05166 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.53■□□□□ 0.24
PCCBP05166 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.53■□□□□ 0.24
PCCBP05166 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.53■□□□□ 0.24
PCCBP05166 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCCBP05166 AP002490.2-201ENST00000524791 560 ntBASIC16.53■□□□□ 0.24
PCCBP05166 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.53■□□□□ 0.24
PCCBP05166 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.53■□□□□ 0.24
PCCBP05166 LINC00628-201ENST00000628516 1289 ntBASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms