Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 AP001350.2-201ENST00000625104 1094 ntBASIC20.05■□□□□ 0.8
CHGBP05060 AL513210.1-201ENST00000629608 234 ntBASIC20.05■□□□□ 0.8
CHGBP05060 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHGBP05060 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CHGBP05060 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHGBP05060 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHGBP05060 AC020916.1-201ENST00000587762 1774 ntBASIC20.05■□□□□ 0.8
CHGBP05060 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CHGBP05060 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC20.05■□□□□ 0.8
CHGBP05060 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
CHGBP05060 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CHGBP05060 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHGBP05060 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CHGBP05060 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.04■□□□□ 0.8
CHGBP05060 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CHGBP05060 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHGBP05060 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHGBP05060 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHGBP05060 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC20.04■□□□□ 0.8
CHGBP05060 NARF-206ENST00000457415 1668 ntTSL 5 BASIC20.04■□□□□ 0.8
CHGBP05060 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHGBP05060 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHGBP05060 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC20.04■□□□□ 0.8
CHGBP05060 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
CHGBP05060 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHGBP05060 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHGBP05060 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHGBP05060 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHGBP05060 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.04■□□□□ 0.8
CHGBP05060 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC20.04■□□□□ 0.8
CHGBP05060 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHGBP05060 AP006288.1-201ENST00000446065 395 ntBASIC20.04■□□□□ 0.8
CHGBP05060 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC20.04■□□□□ 0.8
CHGBP05060 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC20.04■□□□□ 0.8
CHGBP05060 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC20.04■□□□□ 0.8
CHGBP05060 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHGBP05060 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CHGBP05060 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CHGBP05060 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC20.04■□□□□ 0.8
CHGBP05060 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC20.04■□□□□ 0.8
CHGBP05060 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.04■□□□□ 0.8
CHGBP05060 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CHGBP05060 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC20.04■□□□□ 0.8
CHGBP05060 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CHGBP05060 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC20.04■□□□□ 0.8
CHGBP05060 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
CHGBP05060 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CHGBP05060 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC20.04■□□□□ 0.8
CHGBP05060 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHGBP05060 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CHGBP05060 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CHGBP05060 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
CHGBP05060 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHGBP05060 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CHGBP05060 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHGBP05060 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC20.03■□□□□ 0.8
CHGBP05060 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHGBP05060 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHGBP05060 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHGBP05060 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC20.03■□□□□ 0.8
CHGBP05060 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CHGBP05060 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHGBP05060 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHGBP05060 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHGBP05060 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CHGBP05060 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHGBP05060 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHGBP05060 SPCS2P4-201ENST00000436160 681 ntBASIC20.03■□□□□ 0.8
CHGBP05060 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHGBP05060 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CHGBP05060 AC079140.1-201ENST00000508039 487 ntBASIC20.03■□□□□ 0.8
CHGBP05060 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC20.03■□□□□ 0.8
CHGBP05060 LINC01225-203ENST00000563550 1244 ntBASIC20.03■□□□□ 0.8
CHGBP05060 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC20.03■□□□□ 0.8
CHGBP05060 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC20.03■□□□□ 0.8
CHGBP05060 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC20.03■□□□□ 0.8
CHGBP05060 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC20.03■□□□□ 0.8
CHGBP05060 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CHGBP05060 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHGBP05060 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHGBP05060 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHGBP05060 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC20.03■□□□□ 0.8
CHGBP05060 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CHGBP05060 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.03■□□□□ 0.8
CHGBP05060 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHGBP05060 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC20.03■□□□□ 0.8
CHGBP05060 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CHGBP05060 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
CHGBP05060 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHGBP05060 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHGBP05060 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CHGBP05060 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
CHGBP05060 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHGBP05060 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CHGBP05060 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC20.02■□□□□ 0.8
CHGBP05060 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
CHGBP05060 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHGBP05060 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CHGBP05060 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC20.02■□□□□ 0.8
CHGBP05060 PMS2P4-201ENST00000412466 1052 ntBASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms