Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 AL589182.2-201ENST00000619332 1049 ntBASIC14.88□□□□□ -0.03
APOC1P02654 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC14.88□□□□□ -0.03
APOC1P02654 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
APOC1P02654 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOC1P02654 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
APOC1P02654 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.88□□□□□ -0.03
APOC1P02654 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOC1P02654 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.88□□□□□ -0.03
APOC1P02654 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
APOC1P02654 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOC1P02654 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOC1P02654 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
APOC1P02654 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.88□□□□□ -0.03
APOC1P02654 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
APOC1P02654 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOC1P02654 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
APOC1P02654 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
APOC1P02654 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.88□□□□□ -0.03
APOC1P02654 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
APOC1P02654 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOC1P02654 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOC1P02654 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
APOC1P02654 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOC1P02654 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
APOC1P02654 AGGF1P2-201ENST00000426656 2106 ntBASIC14.87□□□□□ -0.03
APOC1P02654 AC004817.3-201ENST00000602957 2129 ntBASIC14.87□□□□□ -0.03
APOC1P02654 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
APOC1P02654 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOC1P02654 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
APOC1P02654 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
APOC1P02654 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
APOC1P02654 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOC1P02654 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.87□□□□□ -0.03
APOC1P02654 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
APOC1P02654 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOC1P02654 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.87□□□□□ -0.03
APOC1P02654 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
APOC1P02654 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOC1P02654 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOC1P02654 UPK3BP1-201ENST00000428678 509 ntBASIC14.87□□□□□ -0.03
APOC1P02654 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC14.87□□□□□ -0.03
APOC1P02654 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.87□□□□□ -0.03
APOC1P02654 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.87□□□□□ -0.03
APOC1P02654 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOC1P02654 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
APOC1P02654 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.87□□□□□ -0.03
APOC1P02654 AL353135.1-201ENST00000606729 504 ntBASIC14.87□□□□□ -0.03
APOC1P02654 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.87□□□□□ -0.03
APOC1P02654 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
APOC1P02654 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOC1P02654 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOC1P02654 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
APOC1P02654 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.87□□□□□ -0.03
APOC1P02654 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.87□□□□□ -0.03
APOC1P02654 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
APOC1P02654 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
APOC1P02654 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.87□□□□□ -0.03
APOC1P02654 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
APOC1P02654 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
APOC1P02654 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOC1P02654 UBALD1-205ENST00000590891 2641 ntBASIC14.87□□□□□ -0.03
APOC1P02654 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOC1P02654 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
APOC1P02654 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.87□□□□□ -0.03
APOC1P02654 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.87□□□□□ -0.03
APOC1P02654 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
APOC1P02654 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
APOC1P02654 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
APOC1P02654 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOC1P02654 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
APOC1P02654 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.87□□□□□ -0.03
APOC1P02654 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOC1P02654 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.87□□□□□ -0.03
APOC1P02654 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
APOC1P02654 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC14.87□□□□□ -0.03
APOC1P02654 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
APOC1P02654 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.86□□□□□ -0.03
APOC1P02654 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.86□□□□□ -0.03
APOC1P02654 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOC1P02654 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
APOC1P02654 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOC1P02654 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOC1P02654 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
APOC1P02654 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOC1P02654 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOC1P02654 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOC1P02654 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.86□□□□□ -0.03
APOC1P02654 SCARNA2-201ENST00000458748 420 ntBASIC14.86□□□□□ -0.03
APOC1P02654 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
APOC1P02654 FOSL1P1-201ENST00000511041 816 ntBASIC14.86□□□□□ -0.03
APOC1P02654 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
APOC1P02654 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.86□□□□□ -0.03
APOC1P02654 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.86□□□□□ -0.03
APOC1P02654 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.86□□□□□ -0.03
APOC1P02654 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
APOC1P02654 AP001269.4-201ENST00000609611 512 ntBASIC14.86□□□□□ -0.03
APOC1P02654 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.86□□□□□ -0.03
APOC1P02654 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.86□□□□□ -0.03
APOC1P02654 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
APOC1P02654 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms