Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CD4P01730 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CD4P01730 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD4P01730 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CD4P01730 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD4P01730 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.39■□□□□ 0.53
CD4P01730 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD4P01730 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD4P01730 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
CD4P01730 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD4P01730 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD4P01730 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CD4P01730 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.39■□□□□ 0.53
CD4P01730 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.39■□□□□ 0.53
CD4P01730 KRT18P34-201ENST00000488218 1270 ntBASIC18.39■□□□□ 0.53
CD4P01730 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.39■□□□□ 0.53
CD4P01730 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD4P01730 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.39■□□□□ 0.53
CD4P01730 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CD4P01730 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.39■□□□□ 0.53
CD4P01730 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.39■□□□□ 0.53
CD4P01730 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.39■□□□□ 0.53
CD4P01730 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.39■□□□□ 0.53
CD4P01730 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CD4P01730 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CD4P01730 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD4P01730 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CD4P01730 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.39■□□□□ 0.53
CD4P01730 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.39■□□□□ 0.53
CD4P01730 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.39■□□□□ 0.53
CD4P01730 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CD4P01730 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.38■□□□□ 0.53
CD4P01730 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CD4P01730 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CD4P01730 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CD4P01730 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD4P01730 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD4P01730 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD4P01730 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD4P01730 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD4P01730 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CD4P01730 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.38■□□□□ 0.53
CD4P01730 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD4P01730 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CD4P01730 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.38■□□□□ 0.53
CD4P01730 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.38■□□□□ 0.53
CD4P01730 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.38■□□□□ 0.53
CD4P01730 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CD4P01730 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CD4P01730 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.38■□□□□ 0.53
CD4P01730 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.38■□□□□ 0.53
CD4P01730 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.38■□□□□ 0.53
CD4P01730 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CD4P01730 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD4P01730 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.38■□□□□ 0.53
CD4P01730 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.38■□□□□ 0.53
CD4P01730 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC18.38■□□□□ 0.53
CD4P01730 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CD4P01730 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CD4P01730 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CD4P01730 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CD4P01730 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.38■□□□□ 0.53
CD4P01730 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD4P01730 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.37■□□□□ 0.53
CD4P01730 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CD4P01730 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.37■□□□□ 0.53
CD4P01730 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CD4P01730 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD4P01730 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.37■□□□□ 0.53
CD4P01730 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.37■□□□□ 0.53
CD4P01730 HLA-H-201ENST00000383620 1096 ntBASIC18.37■□□□□ 0.53
CD4P01730 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CD4P01730 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD4P01730 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CD4P01730 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.37■□□□□ 0.53
CD4P01730 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.37■□□□□ 0.53
CD4P01730 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.37■□□□□ 0.53
CD4P01730 AL353779.1-201ENST00000434793 351 ntBASIC18.37■□□□□ 0.53
CD4P01730 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC18.37■□□□□ 0.53
CD4P01730 PTPA-220ENST00000436883 532 ntTSL 4 BASIC18.37■□□□□ 0.53
CD4P01730 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.37■□□□□ 0.53
CD4P01730 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CD4P01730 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.37■□□□□ 0.53
CD4P01730 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.37■□□□□ 0.53
CD4P01730 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.37■□□□□ 0.53
CD4P01730 AL132655.2-201ENST00000596276 594 ntBASIC18.37■□□□□ 0.53
CD4P01730 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.37■□□□□ 0.53
CD4P01730 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD4P01730 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.37■□□□□ 0.53
CD4P01730 KRT8P49-201ENST00000604166 1432 ntBASIC18.37■□□□□ 0.53
CD4P01730 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.37■□□□□ 0.53
CD4P01730 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CD4P01730 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.37■□□□□ 0.53
CD4P01730 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.37■□□□□ 0.53
CD4P01730 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD4P01730 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD4P01730 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CD4P01730 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CD4P01730 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CD4P01730 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms