Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TIMP1P01033 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TIMP1P01033 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TIMP1P01033 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TIMP1P01033 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TIMP1P01033 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TIMP1P01033 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
TIMP1P01033 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TIMP1P01033 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TIMP1P01033 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.86■□□□□ 0.45
TIMP1P01033 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.86■□□□□ 0.45
TIMP1P01033 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TIMP1P01033 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.86■□□□□ 0.45
TIMP1P01033 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
TIMP1P01033 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
TIMP1P01033 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
TIMP1P01033 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.86■□□□□ 0.45
TIMP1P01033 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TIMP1P01033 AL583810.1-201ENST00000553344 1045 ntBASIC17.86■□□□□ 0.45
TIMP1P01033 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.86■□□□□ 0.45
TIMP1P01033 RN7SL219P-201ENST00000582872 296 ntBASIC17.86■□□□□ 0.45
TIMP1P01033 AC010319.3-201ENST00000597028 470 ntBASIC17.86■□□□□ 0.45
TIMP1P01033 MIR6869-201ENST00000619434 62 ntBASIC17.86■□□□□ 0.45
TIMP1P01033 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.86■□□□□ 0.45
TIMP1P01033 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
TIMP1P01033 KRT8P44-201ENST00000441609 1350 ntBASIC17.86■□□□□ 0.45
TIMP1P01033 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TIMP1P01033 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.86■□□□□ 0.45
TIMP1P01033 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TIMP1P01033 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TIMP1P01033 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TIMP1P01033 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TIMP1P01033 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TIMP1P01033 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TIMP1P01033 CDC14C-201ENST00000428251 1719 ntBASIC17.86■□□□□ 0.45
TIMP1P01033 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TIMP1P01033 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TIMP1P01033 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TIMP1P01033 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.85■□□□□ 0.45
TIMP1P01033 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TIMP1P01033 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TIMP1P01033 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TIMP1P01033 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TIMP1P01033 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TIMP1P01033 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
TIMP1P01033 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TIMP1P01033 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TIMP1P01033 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.85■□□□□ 0.45
TIMP1P01033 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TIMP1P01033 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TIMP1P01033 MIR1908-201ENST00000410394 80 ntBASIC17.85■□□□□ 0.45
TIMP1P01033 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
TIMP1P01033 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.85■□□□□ 0.45
TIMP1P01033 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.85■□□□□ 0.45
TIMP1P01033 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.85■□□□□ 0.45
TIMP1P01033 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TIMP1P01033 AC104596.2-201ENST00000512793 793 ntBASIC17.85■□□□□ 0.45
TIMP1P01033 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TIMP1P01033 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TIMP1P01033 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TIMP1P01033 TIMM17BP1-201ENST00000545713 516 ntBASIC17.85■□□□□ 0.45
TIMP1P01033 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.85■□□□□ 0.45
TIMP1P01033 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.85■□□□□ 0.45
TIMP1P01033 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.85■□□□□ 0.45
TIMP1P01033 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TIMP1P01033 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
TIMP1P01033 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TIMP1P01033 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.85■□□□□ 0.45
TIMP1P01033 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.85■□□□□ 0.45
TIMP1P01033 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TIMP1P01033 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TIMP1P01033 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TIMP1P01033 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TIMP1P01033 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.84■□□□□ 0.45
TIMP1P01033 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TIMP1P01033 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TIMP1P01033 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TIMP1P01033 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.84■□□□□ 0.45
TIMP1P01033 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TIMP1P01033 CLK3P2-201ENST00000427566 1453 ntBASIC17.84■□□□□ 0.45
TIMP1P01033 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TIMP1P01033 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TIMP1P01033 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TIMP1P01033 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TIMP1P01033 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
TIMP1P01033 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TIMP1P01033 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TIMP1P01033 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TIMP1P01033 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TIMP1P01033 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
TIMP1P01033 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TIMP1P01033 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
TIMP1P01033 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TIMP1P01033 USB1-203ENST00000539737 1212 ntTSL 2 BASIC17.84■□□□□ 0.45
TIMP1P01033 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TIMP1P01033 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TIMP1P01033 RARRES2P5-201ENST00000564013 466 ntBASIC17.84■□□□□ 0.45
TIMP1P01033 RPS24-214ENST00000613865 538 ntTSL 5 BASIC17.84■□□□□ 0.45
TIMP1P01033 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.84■□□□□ 0.45
TIMP1P01033 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 224.1 ms