Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDRT1O95170 GPR32P1-201ENST00000601788 811 ntBASIC15□□□□□ -0.01
CDRT1O95170 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15□□□□□ -0.01
CDRT1O95170 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15□□□□□ -0.01
CDRT1O95170 AC133561.5-201ENST00000635547 218 ntBASIC15□□□□□ -0.01
CDRT1O95170 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDRT1O95170 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDRT1O95170 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDRT1O95170 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDRT1O95170 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDRT1O95170 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15□□□□□ -0.01
CDRT1O95170 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDRT1O95170 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
CDRT1O95170 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
CDRT1O95170 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15□□□□□ -0.01
CDRT1O95170 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CDRT1O95170 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDRT1O95170 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15□□□□□ -0.01
CDRT1O95170 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDRT1O95170 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDRT1O95170 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CDRT1O95170 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDRT1O95170 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15□□□□□ -0.01
CDRT1O95170 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDRT1O95170 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
CDRT1O95170 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDRT1O95170 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDRT1O95170 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15□□□□□ -0.01
CDRT1O95170 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDRT1O95170 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
CDRT1O95170 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDRT1O95170 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.99□□□□□ -0.01
CDRT1O95170 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDRT1O95170 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDRT1O95170 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDRT1O95170 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDRT1O95170 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDRT1O95170 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDRT1O95170 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CDRT1O95170 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDRT1O95170 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDRT1O95170 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.99□□□□□ -0.01
CDRT1O95170 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDRT1O95170 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDRT1O95170 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDRT1O95170 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.99□□□□□ -0.01
CDRT1O95170 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CDRT1O95170 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CDRT1O95170 TERF1P1-201ENST00000311003 1181 ntBASIC14.99□□□□□ -0.01
CDRT1O95170 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC14.99□□□□□ -0.01
CDRT1O95170 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDRT1O95170 AL359075.1-203ENST00000462729 1002 ntBASIC14.99□□□□□ -0.01
CDRT1O95170 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC14.99□□□□□ -0.01
CDRT1O95170 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC14.99□□□□□ -0.01
CDRT1O95170 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.99□□□□□ -0.01
CDRT1O95170 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC14.99□□□□□ -0.01
CDRT1O95170 AC005363.2-201ENST00000618631 242 ntBASIC14.99□□□□□ -0.01
CDRT1O95170 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.99□□□□□ -0.01
CDRT1O95170 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.99□□□□□ -0.01
CDRT1O95170 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
CDRT1O95170 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDRT1O95170 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDRT1O95170 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.99□□□□□ -0.01
CDRT1O95170 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDRT1O95170 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDRT1O95170 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDRT1O95170 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CDRT1O95170 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDRT1O95170 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
CDRT1O95170 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
CDRT1O95170 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CDRT1O95170 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDRT1O95170 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CDRT1O95170 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.98□□□□□ -0.01
CDRT1O95170 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDRT1O95170 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDRT1O95170 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDRT1O95170 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.98□□□□□ -0.01
CDRT1O95170 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDRT1O95170 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDRT1O95170 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.98□□□□□ -0.01
CDRT1O95170 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDRT1O95170 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.98□□□□□ -0.01
CDRT1O95170 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CDRT1O95170 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.98□□□□□ -0.01
CDRT1O95170 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDRT1O95170 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.98□□□□□ -0.01
CDRT1O95170 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDRT1O95170 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CDRT1O95170 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDRT1O95170 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDRT1O95170 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDRT1O95170 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDRT1O95170 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDRT1O95170 AC113347.1-201ENST00000413321 391 ntBASIC14.98□□□□□ -0.01
CDRT1O95170 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC14.98□□□□□ -0.01
CDRT1O95170 AC117947.1-201ENST00000427448 529 ntBASIC14.98□□□□□ -0.01
CDRT1O95170 GXYLT1P3-201ENST00000453058 1193 ntBASIC14.98□□□□□ -0.01
CDRT1O95170 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CDRT1O95170 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms