Protein–RNA interactions for Protein: O95167

NDUFA3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3O95167 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.4□□□□□ -0.26
NDUFA3O95167 IGLL3P-201ENST00000412472 434 ntBASIC13.4□□□□□ -0.26
NDUFA3O95167 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC13.4□□□□□ -0.26
NDUFA3O95167 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NDUFA3O95167 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NDUFA3O95167 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC13.4□□□□□ -0.26
NDUFA3O95167 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.4□□□□□ -0.26
NDUFA3O95167 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC13.4□□□□□ -0.26
NDUFA3O95167 POLD4-207ENST00000531239 584 ntTSL 2 BASIC13.4□□□□□ -0.26
NDUFA3O95167 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NDUFA3O95167 CD63-210ENST00000550776 870 ntTSL 5 BASIC13.4□□□□□ -0.26
NDUFA3O95167 AC034105.1-201ENST00000563488 319 ntBASIC13.4□□□□□ -0.26
NDUFA3O95167 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NDUFA3O95167 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.4□□□□□ -0.26
NDUFA3O95167 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13.4□□□□□ -0.26
NDUFA3O95167 BX640515.1-201ENST00000617215 977 ntBASIC13.4□□□□□ -0.26
NDUFA3O95167 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NDUFA3O95167 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NDUFA3O95167 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
NDUFA3O95167 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
NDUFA3O95167 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
NDUFA3O95167 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NDUFA3O95167 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NDUFA3O95167 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.4□□□□□ -0.26
NDUFA3O95167 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
NDUFA3O95167 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.4□□□□□ -0.26
NDUFA3O95167 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
NDUFA3O95167 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NDUFA3O95167 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
NDUFA3O95167 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
NDUFA3O95167 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC13.4□□□□□ -0.26
NDUFA3O95167 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC13.4□□□□□ -0.26
NDUFA3O95167 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
NDUFA3O95167 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.4□□□□□ -0.27
NDUFA3O95167 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA3O95167 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA3O95167 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA3O95167 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA3O95167 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA3O95167 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA3O95167 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA3O95167 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA3O95167 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
NDUFA3O95167 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA3O95167 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA3O95167 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC13.39□□□□□ -0.27
NDUFA3O95167 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA3O95167 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
NDUFA3O95167 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA3O95167 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA3O95167 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA3O95167 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA3O95167 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
NDUFA3O95167 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.39□□□□□ -0.27
NDUFA3O95167 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.39□□□□□ -0.27
NDUFA3O95167 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC13.39□□□□□ -0.27
NDUFA3O95167 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC13.39□□□□□ -0.27
NDUFA3O95167 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC13.39□□□□□ -0.27
NDUFA3O95167 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA3O95167 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.39□□□□□ -0.27
NDUFA3O95167 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA3O95167 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA3O95167 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
NDUFA3O95167 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC13.39□□□□□ -0.27
NDUFA3O95167 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC13.39□□□□□ -0.27
NDUFA3O95167 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
NDUFA3O95167 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA3O95167 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA3O95167 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
NDUFA3O95167 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA3O95167 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA3O95167 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.39□□□□□ -0.27
NDUFA3O95167 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
NDUFA3O95167 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
NDUFA3O95167 KRT8P39-201ENST00000396270 1433 ntBASIC13.39□□□□□ -0.27
NDUFA3O95167 AC104109.2-201ENST00000602919 1418 ntBASIC13.39□□□□□ -0.27
NDUFA3O95167 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
NDUFA3O95167 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NDUFA3O95167 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
NDUFA3O95167 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NDUFA3O95167 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NDUFA3O95167 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NDUFA3O95167 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NDUFA3O95167 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
NDUFA3O95167 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
NDUFA3O95167 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.38□□□□□ -0.27
NDUFA3O95167 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NDUFA3O95167 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NDUFA3O95167 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NDUFA3O95167 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC13.38□□□□□ -0.27
NDUFA3O95167 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.38□□□□□ -0.27
NDUFA3O95167 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NDUFA3O95167 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC13.38□□□□□ -0.27
NDUFA3O95167 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NDUFA3O95167 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC13.38□□□□□ -0.27
NDUFA3O95167 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.38□□□□□ -0.27
NDUFA3O95167 AL590627.1-203ENST00000421194 1026 ntBASIC13.38□□□□□ -0.27
NDUFA3O95167 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.38□□□□□ -0.27
NDUFA3O95167 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.38□□□□□ -0.27
NDUFA3O95167 RPL13AP23-201ENST00000480739 586 ntBASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms