Protein–RNA interactions for Protein: O75317

USP12, Ubiquitin carboxyl-terminal hydrolase 12, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP12O75317 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
USP12O75317 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
USP12O75317 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP12O75317 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP12O75317 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
USP12O75317 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP12O75317 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP12O75317 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP12O75317 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
USP12O75317 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP12O75317 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.14■□□□□ 0.33
USP12O75317 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.14■□□□□ 0.33
USP12O75317 AC073621.1-201ENST00000392730 636 ntBASIC17.14■□□□□ 0.33
USP12O75317 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.14■□□□□ 0.33
USP12O75317 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.14■□□□□ 0.33
USP12O75317 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.14■□□□□ 0.33
USP12O75317 KRT18P27-201ENST00000427733 1299 ntBASIC17.14■□□□□ 0.33
USP12O75317 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.14■□□□□ 0.33
USP12O75317 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.14■□□□□ 0.33
USP12O75317 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.14■□□□□ 0.33
USP12O75317 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.14■□□□□ 0.33
USP12O75317 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.14■□□□□ 0.33
USP12O75317 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
USP12O75317 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP12O75317 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.14■□□□□ 0.33
USP12O75317 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP12O75317 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.14■□□□□ 0.33
USP12O75317 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP12O75317 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP12O75317 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
USP12O75317 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.14■□□□□ 0.33
USP12O75317 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.14■□□□□ 0.33
USP12O75317 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.14■□□□□ 0.33
USP12O75317 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
USP12O75317 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP12O75317 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
USP12O75317 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP12O75317 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.14■□□□□ 0.33
USP12O75317 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
USP12O75317 AC002310.6-201ENST00000624451 1377 ntBASIC17.14■□□□□ 0.33
USP12O75317 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
USP12O75317 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
USP12O75317 AC092364.2-201ENST00000596710 2692 ntBASIC17.14■□□□□ 0.33
USP12O75317 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP12O75317 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
USP12O75317 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.13■□□□□ 0.33
USP12O75317 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.13■□□□□ 0.33
USP12O75317 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.13■□□□□ 0.33
USP12O75317 AP002414.3-201ENST00000589352 1468 ntBASIC17.13■□□□□ 0.33
USP12O75317 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP12O75317 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP12O75317 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP12O75317 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
USP12O75317 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP12O75317 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.13■□□□□ 0.33
USP12O75317 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
USP12O75317 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
USP12O75317 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP12O75317 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP12O75317 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP12O75317 HMGN1P19-201ENST00000436976 333 ntBASIC17.13■□□□□ 0.33
USP12O75317 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
USP12O75317 RPS15P9-201ENST00000494093 319 ntBASIC17.13■□□□□ 0.33
USP12O75317 UNC93B6-202ENST00000528242 690 ntBASIC17.13■□□□□ 0.33
USP12O75317 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.13■□□□□ 0.33
USP12O75317 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.13■□□□□ 0.33
USP12O75317 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.13■□□□□ 0.33
USP12O75317 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.13■□□□□ 0.33
USP12O75317 AL355385.1-201ENST00000606123 409 ntBASIC17.13■□□□□ 0.33
USP12O75317 AL805961.1-202ENST00000641562 540 ntBASIC17.13■□□□□ 0.33
USP12O75317 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP12O75317 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP12O75317 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
USP12O75317 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
USP12O75317 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.13■□□□□ 0.33
USP12O75317 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP12O75317 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.13■□□□□ 0.33
USP12O75317 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP12O75317 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP12O75317 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.13■□□□□ 0.33
USP12O75317 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
USP12O75317 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.13■□□□□ 0.33
USP12O75317 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
USP12O75317 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP12O75317 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
USP12O75317 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.13■□□□□ 0.33
USP12O75317 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP12O75317 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP12O75317 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.12■□□□□ 0.33
USP12O75317 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.12■□□□□ 0.33
USP12O75317 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
USP12O75317 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP12O75317 AC018695.7-201ENST00000624587 2492 ntBASIC17.12■□□□□ 0.33
USP12O75317 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.12■□□□□ 0.33
USP12O75317 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC17.12■□□□□ 0.33
USP12O75317 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP12O75317 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
USP12O75317 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
USP12O75317 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.12■□□□□ 0.33
USP12O75317 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms