Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
PFDN1O60925 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.95□□□□□ -0.02
PFDN1O60925 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PFDN1O60925 AC093525.9-201ENST00000624961 1746 ntBASIC14.95□□□□□ -0.02
PFDN1O60925 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.95□□□□□ -0.02
PFDN1O60925 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.95□□□□□ -0.02
PFDN1O60925 AC006449.6-201ENST00000612330 2296 ntBASIC14.95□□□□□ -0.02
PFDN1O60925 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
PFDN1O60925 KRT8P3-201ENST00000519669 1449 ntBASIC14.95□□□□□ -0.02
PFDN1O60925 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PFDN1O60925 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
PFDN1O60925 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PFDN1O60925 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PFDN1O60925 AL136116.3-201ENST00000402907 1138 ntBASIC14.95□□□□□ -0.02
PFDN1O60925 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC14.95□□□□□ -0.02
PFDN1O60925 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC14.95□□□□□ -0.02
PFDN1O60925 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC14.95□□□□□ -0.02
PFDN1O60925 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PFDN1O60925 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
PFDN1O60925 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PFDN1O60925 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.95□□□□□ -0.02
PFDN1O60925 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PFDN1O60925 AP006587.1-201ENST00000534129 1502 ntBASIC14.95□□□□□ -0.02
PFDN1O60925 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
PFDN1O60925 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.95□□□□□ -0.02
PFDN1O60925 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PFDN1O60925 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
PFDN1O60925 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PFDN1O60925 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC14.95□□□□□ -0.02
PFDN1O60925 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
PFDN1O60925 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PFDN1O60925 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PFDN1O60925 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PFDN1O60925 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.95□□□□□ -0.02
PFDN1O60925 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PFDN1O60925 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
PFDN1O60925 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC14.95□□□□□ -0.02
PFDN1O60925 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
PFDN1O60925 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
PFDN1O60925 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
PFDN1O60925 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
PFDN1O60925 REXO1L1P-202ENST00000608646 1974 ntBASIC14.94□□□□□ -0.02
PFDN1O60925 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PFDN1O60925 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PFDN1O60925 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PFDN1O60925 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.94□□□□□ -0.02
PFDN1O60925 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PFDN1O60925 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PFDN1O60925 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
PFDN1O60925 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.94□□□□□ -0.02
PFDN1O60925 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.94□□□□□ -0.02
PFDN1O60925 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PFDN1O60925 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC14.94□□□□□ -0.02
PFDN1O60925 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.94□□□□□ -0.02
PFDN1O60925 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PFDN1O60925 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PFDN1O60925 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PFDN1O60925 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC14.94□□□□□ -0.02
PFDN1O60925 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PFDN1O60925 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC14.94□□□□□ -0.02
PFDN1O60925 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC14.94□□□□□ -0.02
PFDN1O60925 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
PFDN1O60925 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.94□□□□□ -0.02
PFDN1O60925 MIR6084-201ENST00000622012 110 ntBASIC14.94□□□□□ -0.02
PFDN1O60925 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
PFDN1O60925 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PFDN1O60925 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PFDN1O60925 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PFDN1O60925 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
PFDN1O60925 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
PFDN1O60925 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PFDN1O60925 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
PFDN1O60925 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
PFDN1O60925 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PFDN1O60925 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
PFDN1O60925 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PFDN1O60925 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
PFDN1O60925 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
PFDN1O60925 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
PFDN1O60925 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
PFDN1O60925 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.94□□□□□ -0.02
PFDN1O60925 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
PFDN1O60925 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PFDN1O60925 SDHAP2-201ENST00000455183 2001 ntBASIC14.93□□□□□ -0.02
PFDN1O60925 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
PFDN1O60925 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
PFDN1O60925 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.93□□□□□ -0.02
PFDN1O60925 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
PFDN1O60925 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.93□□□□□ -0.02
PFDN1O60925 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PFDN1O60925 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
PFDN1O60925 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PFDN1O60925 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PFDN1O60925 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.93□□□□□ -0.02
PFDN1O60925 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PFDN1O60925 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.93□□□□□ -0.02
PFDN1O60925 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PFDN1O60925 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
PFDN1O60925 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
PFDN1O60925 AL356441.2-201ENST00000443009 864 ntBASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms