Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 KRT8P39-201ENST00000396270 1433 ntBASIC14.92□□□□□ -0.02
TRAF3IP2O43734 AC012569.1-201ENST00000591191 1524 ntBASIC14.92□□□□□ -0.02
TRAF3IP2O43734 AL512652.2-201ENST00000625156 1716 ntBASIC14.92□□□□□ -0.02
TRAF3IP2O43734 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAF3IP2O43734 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
TRAF3IP2O43734 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
TRAF3IP2O43734 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAF3IP2O43734 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TRAF3IP2O43734 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAF3IP2O43734 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
TRAF3IP2O43734 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
TRAF3IP2O43734 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.92□□□□□ -0.02
TRAF3IP2O43734 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
TRAF3IP2O43734 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
TRAF3IP2O43734 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.92□□□□□ -0.02
TRAF3IP2O43734 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAF3IP2O43734 AC096734.2-201ENST00000562054 433 ntBASIC14.92□□□□□ -0.02
TRAF3IP2O43734 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAF3IP2O43734 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAF3IP2O43734 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.92□□□□□ -0.02
TRAF3IP2O43734 AC120114.3-201ENST00000611923 658 ntBASIC14.92□□□□□ -0.02
TRAF3IP2O43734 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.92□□□□□ -0.02
TRAF3IP2O43734 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAF3IP2O43734 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAF3IP2O43734 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAF3IP2O43734 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAF3IP2O43734 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAF3IP2O43734 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAF3IP2O43734 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAF3IP2O43734 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAF3IP2O43734 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
TRAF3IP2O43734 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAF3IP2O43734 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAF3IP2O43734 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAF3IP2O43734 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.92□□□□□ -0.02
TRAF3IP2O43734 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAF3IP2O43734 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAF3IP2O43734 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
TRAF3IP2O43734 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.91□□□□□ -0.02
TRAF3IP2O43734 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAF3IP2O43734 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAF3IP2O43734 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
TRAF3IP2O43734 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TRAF3IP2O43734 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAF3IP2O43734 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.91□□□□□ -0.02
TRAF3IP2O43734 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAF3IP2O43734 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TRAF3IP2O43734 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.91□□□□□ -0.02
TRAF3IP2O43734 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.91□□□□□ -0.02
TRAF3IP2O43734 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.91□□□□□ -0.02
TRAF3IP2O43734 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.91□□□□□ -0.02
TRAF3IP2O43734 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAF3IP2O43734 MIR4515-201ENST00000584082 81 ntBASIC14.91□□□□□ -0.02
TRAF3IP2O43734 AC064836.3-201ENST00000607928 673 ntBASIC14.91□□□□□ -0.02
TRAF3IP2O43734 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
TRAF3IP2O43734 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TRAF3IP2O43734 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.91□□□□□ -0.02
TRAF3IP2O43734 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAF3IP2O43734 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.91□□□□□ -0.02
TRAF3IP2O43734 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAF3IP2O43734 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
TRAF3IP2O43734 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAF3IP2O43734 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
TRAF3IP2O43734 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.91□□□□□ -0.02
TRAF3IP2O43734 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAF3IP2O43734 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TRAF3IP2O43734 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.91□□□□□ -0.02
TRAF3IP2O43734 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAF3IP2O43734 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAF3IP2O43734 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAF3IP2O43734 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.9□□□□□ -0.02
TRAF3IP2O43734 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAF3IP2O43734 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAF3IP2O43734 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAF3IP2O43734 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAF3IP2O43734 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAF3IP2O43734 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAF3IP2O43734 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAF3IP2O43734 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.9□□□□□ -0.02
TRAF3IP2O43734 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAF3IP2O43734 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAF3IP2O43734 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAF3IP2O43734 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAF3IP2O43734 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.9□□□□□ -0.02
TRAF3IP2O43734 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.9□□□□□ -0.02
TRAF3IP2O43734 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRAF3IP2O43734 RHOQP3-201ENST00000437982 621 ntBASIC14.9□□□□□ -0.02
TRAF3IP2O43734 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
TRAF3IP2O43734 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
TRAF3IP2O43734 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.9□□□□□ -0.02
TRAF3IP2O43734 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAF3IP2O43734 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
TRAF3IP2O43734 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.9□□□□□ -0.02
TRAF3IP2O43734 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAF3IP2O43734 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
TRAF3IP2O43734 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.9□□□□□ -0.02
TRAF3IP2O43734 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
TRAF3IP2O43734 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
TRAF3IP2O43734 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TRAF3IP2O43734 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms