Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
CFAP99D6REC4 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CFAP99D6REC4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CFAP99D6REC4 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.76■□□□□ 0.27
CFAP99D6REC4 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CFAP99D6REC4 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CFAP99D6REC4 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CFAP99D6REC4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CFAP99D6REC4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CFAP99D6REC4 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.76■□□□□ 0.27
CFAP99D6REC4 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CFAP99D6REC4 UBALD1-205ENST00000590891 2641 ntBASIC16.76■□□□□ 0.27
CFAP99D6REC4 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CFAP99D6REC4 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CFAP99D6REC4 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CFAP99D6REC4 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.76■□□□□ 0.27
CFAP99D6REC4 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CFAP99D6REC4 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CFAP99D6REC4 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CFAP99D6REC4 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CFAP99D6REC4 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
CFAP99D6REC4 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
CFAP99D6REC4 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CFAP99D6REC4 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CFAP99D6REC4 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.75■□□□□ 0.27
CFAP99D6REC4 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CFAP99D6REC4 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.75■□□□□ 0.27
CFAP99D6REC4 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CFAP99D6REC4 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CFAP99D6REC4 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CFAP99D6REC4 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CFAP99D6REC4 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CFAP99D6REC4 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.75■□□□□ 0.27
CFAP99D6REC4 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CFAP99D6REC4 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CFAP99D6REC4 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CFAP99D6REC4 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CFAP99D6REC4 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.75■□□□□ 0.27
CFAP99D6REC4 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CFAP99D6REC4 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.75■□□□□ 0.27
CFAP99D6REC4 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.75■□□□□ 0.27
CFAP99D6REC4 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.75■□□□□ 0.27
CFAP99D6REC4 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.75■□□□□ 0.27
CFAP99D6REC4 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.75■□□□□ 0.27
CFAP99D6REC4 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.75■□□□□ 0.27
CFAP99D6REC4 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.75■□□□□ 0.27
CFAP99D6REC4 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CFAP99D6REC4 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.75■□□□□ 0.27
CFAP99D6REC4 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.75■□□□□ 0.27
CFAP99D6REC4 REXO1L3P-201ENST00000622202 1288 ntBASIC16.75■□□□□ 0.27
CFAP99D6REC4 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CFAP99D6REC4 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CFAP99D6REC4 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.75■□□□□ 0.27
CFAP99D6REC4 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CFAP99D6REC4 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.75■□□□□ 0.27
CFAP99D6REC4 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CFAP99D6REC4 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CFAP99D6REC4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.75■□□□□ 0.27
CFAP99D6REC4 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CFAP99D6REC4 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.75■□□□□ 0.27
CFAP99D6REC4 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CFAP99D6REC4 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CFAP99D6REC4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CFAP99D6REC4 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CFAP99D6REC4 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.74■□□□□ 0.27
CFAP99D6REC4 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.74■□□□□ 0.27
CFAP99D6REC4 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CFAP99D6REC4 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CFAP99D6REC4 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CFAP99D6REC4 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CFAP99D6REC4 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.74■□□□□ 0.27
CFAP99D6REC4 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CFAP99D6REC4 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CFAP99D6REC4 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.74■□□□□ 0.27
CFAP99D6REC4 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.74■□□□□ 0.27
CFAP99D6REC4 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CFAP99D6REC4 TEX30-205ENST00000376029 959 ntTSL 2 BASIC16.74■□□□□ 0.27
CFAP99D6REC4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.74■□□□□ 0.27
CFAP99D6REC4 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
CFAP99D6REC4 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CFAP99D6REC4 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.74■□□□□ 0.27
CFAP99D6REC4 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CFAP99D6REC4 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.74■□□□□ 0.27
CFAP99D6REC4 RN7SL602P-201ENST00000578326 324 ntBASIC16.74■□□□□ 0.27
CFAP99D6REC4 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CFAP99D6REC4 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CFAP99D6REC4 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CFAP99D6REC4 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
CFAP99D6REC4 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CFAP99D6REC4 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.74■□□□□ 0.27
CFAP99D6REC4 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CFAP99D6REC4 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CFAP99D6REC4 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.74■□□□□ 0.27
CFAP99D6REC4 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CFAP99D6REC4 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CFAP99D6REC4 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CFAP99D6REC4 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CFAP99D6REC4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CFAP99D6REC4 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CFAP99D6REC4 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms