Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM235A6NFC5 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM235A6NFC5 TERF1P1-201ENST00000311003 1181 ntBASIC14.36□□□□□ -0.11
TMEM235A6NFC5 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM235A6NFC5 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM235A6NFC5 RNF152P1-201ENST00000397754 604 ntBASIC14.36□□□□□ -0.11
TMEM235A6NFC5 AC113347.1-201ENST00000413321 391 ntBASIC14.36□□□□□ -0.11
TMEM235A6NFC5 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM235A6NFC5 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.36□□□□□ -0.11
TMEM235A6NFC5 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC14.36□□□□□ -0.11
TMEM235A6NFC5 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC14.36□□□□□ -0.11
TMEM235A6NFC5 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM235A6NFC5 AD001527.2-201ENST00000622994 785 ntBASIC14.36□□□□□ -0.11
TMEM235A6NFC5 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TMEM235A6NFC5 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TMEM235A6NFC5 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.36□□□□□ -0.11
TMEM235A6NFC5 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM235A6NFC5 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM235A6NFC5 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TMEM235A6NFC5 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TMEM235A6NFC5 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM235A6NFC5 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.36□□□□□ -0.11
TMEM235A6NFC5 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
TMEM235A6NFC5 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TMEM235A6NFC5 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM235A6NFC5 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM235A6NFC5 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM235A6NFC5 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM235A6NFC5 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.35□□□□□ -0.11
TMEM235A6NFC5 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
TMEM235A6NFC5 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM235A6NFC5 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM235A6NFC5 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM235A6NFC5 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM235A6NFC5 AC023824.1-201ENST00000562945 2975 ntBASIC14.35□□□□□ -0.11
TMEM235A6NFC5 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM235A6NFC5 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM235A6NFC5 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM235A6NFC5 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM235A6NFC5 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
TMEM235A6NFC5 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM235A6NFC5 TSPY22P-201ENST00000427496 604 ntBASIC14.35□□□□□ -0.11
TMEM235A6NFC5 NUS1P1-201ENST00000446295 882 ntBASIC14.35□□□□□ -0.11
TMEM235A6NFC5 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM235A6NFC5 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM235A6NFC5 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC14.35□□□□□ -0.11
TMEM235A6NFC5 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.35□□□□□ -0.11
TMEM235A6NFC5 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.35□□□□□ -0.11
TMEM235A6NFC5 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.35□□□□□ -0.11
TMEM235A6NFC5 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM235A6NFC5 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM235A6NFC5 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM235A6NFC5 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM235A6NFC5 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TMEM235A6NFC5 AC126755.1-201ENST00000525846 6405 ntBASIC14.35□□□□□ -0.11
TMEM235A6NFC5 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC14.35□□□□□ -0.11
TMEM235A6NFC5 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM235A6NFC5 AC104640.1-201ENST00000562617 2109 ntBASIC14.35□□□□□ -0.11
TMEM235A6NFC5 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.35□□□□□ -0.11
TMEM235A6NFC5 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM235A6NFC5 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM235A6NFC5 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TMEM235A6NFC5 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TMEM235A6NFC5 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM235A6NFC5 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
TMEM235A6NFC5 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TMEM235A6NFC5 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
TMEM235A6NFC5 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM235A6NFC5 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.34□□□□□ -0.11
TMEM235A6NFC5 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TMEM235A6NFC5 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM235A6NFC5 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM235A6NFC5 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM235A6NFC5 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.34□□□□□ -0.11
TMEM235A6NFC5 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM235A6NFC5 CD9-202ENST00000382515 1229 ntTSL 5 BASIC14.34□□□□□ -0.11
TMEM235A6NFC5 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM235A6NFC5 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14.34□□□□□ -0.11
TMEM235A6NFC5 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TMEM235A6NFC5 AC009533.2-201ENST00000543664 586 ntBASIC14.34□□□□□ -0.11
TMEM235A6NFC5 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM235A6NFC5 CLN6-204ENST00000564752 900 ntTSL 3 BASIC14.34□□□□□ -0.11
TMEM235A6NFC5 AL603832.2-201ENST00000566195 2125 ntBASIC14.34□□□□□ -0.11
TMEM235A6NFC5 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC14.34□□□□□ -0.11
TMEM235A6NFC5 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC14.34□□□□□ -0.11
TMEM235A6NFC5 IGHV3-41-201ENST00000613121 348 ntBASIC14.34□□□□□ -0.11
TMEM235A6NFC5 AC083849.1-201ENST00000615227 514 ntBASIC14.34□□□□□ -0.11
TMEM235A6NFC5 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TMEM235A6NFC5 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.34□□□□□ -0.11
TMEM235A6NFC5 CLN6-214ENST00000636314 442 ntTSL 3 BASIC14.34□□□□□ -0.11
TMEM235A6NFC5 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM235A6NFC5 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.34□□□□□ -0.11
TMEM235A6NFC5 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.34□□□□□ -0.11
TMEM235A6NFC5 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.34□□□□□ -0.11
TMEM235A6NFC5 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM235A6NFC5 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM235A6NFC5 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.34□□□□□ -0.11
TMEM235A6NFC5 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM235A6NFC5 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TMEM235A6NFC5 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms