Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TRAV5A0A0B4J249 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV5A0A0B4J249 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
TRAV5A0A0B4J249 AL021920.2-201ENST00000624828 1351 ntBASIC13.07□□□□□ -0.32
TRAV5A0A0B4J249 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
TRAV5A0A0B4J249 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV5A0A0B4J249 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
TRAV5A0A0B4J249 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV5A0A0B4J249 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAV5A0A0B4J249 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV5A0A0B4J249 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV5A0A0B4J249 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV5A0A0B4J249 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV5A0A0B4J249 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV5A0A0B4J249 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV5A0A0B4J249 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV5A0A0B4J249 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV5A0A0B4J249 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV5A0A0B4J249 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAV5A0A0B4J249 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAV5A0A0B4J249 HLA-J-202ENST00000469281 1241 ntBASIC13.07□□□□□ -0.32
TRAV5A0A0B4J249 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV5A0A0B4J249 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV5A0A0B4J249 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV5A0A0B4J249 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAV5A0A0B4J249 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAV5A0A0B4J249 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAV5A0A0B4J249 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV5A0A0B4J249 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV5A0A0B4J249 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
TRAV5A0A0B4J249 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV5A0A0B4J249 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV5A0A0B4J249 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAV5A0A0B4J249 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV5A0A0B4J249 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
TRAV5A0A0B4J249 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV5A0A0B4J249 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC13.07□□□□□ -0.32
TRAV5A0A0B4J249 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC13.07□□□□□ -0.32
TRAV5A0A0B4J249 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV5A0A0B4J249 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV5A0A0B4J249 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TRAV5A0A0B4J249 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
TRAV5A0A0B4J249 AL596087.1-201ENST00000400979 1969 ntBASIC13.07□□□□□ -0.32
TRAV5A0A0B4J249 NORAD-201ENST00000565493 5339 ntBASIC13.07□□□□□ -0.32
TRAV5A0A0B4J249 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 FLJ16779-201ENST00000612722 7638 ntBASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 HNRNPRP1-201ENST00000453465 1695 ntBASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 FOS-208ENST00000555686 1496 ntTSL 2 BASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 TP73-AS1-210ENST00000637775 1455 ntBASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 DANCR-204ENST00000444958 709 ntTSL 3 BASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 AP005901.3-202ENST00000581653 237 ntBASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TRAV5A0A0B4J249 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC13.06□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms