Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.26■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 AC011676.5-201ENST00000624864 2660 ntBASIC15.26■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.26■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.25■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.25■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.25■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.25■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.25■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.25■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.25■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.25■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 AC112482.1-201ENST00000492080 688 ntBASIC15.25■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 AC018845.2-201ENST00000568326 409 ntBASIC15.25■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 MIR3687-2-201ENST00000577708 61 ntBASIC15.25■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 MIR4515-201ENST00000584082 81 ntBASIC15.25■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.25■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.25■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 MTDHP5-201ENST00000598980 586 ntBASIC15.25■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 MIR3687-1-201ENST00000614492 61 ntBASIC15.25■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.25■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.25■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 AL603756.1-201ENST00000606511 2163 ntBASIC15.25■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC15.25■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.25■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.25■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.25■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.24■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.24■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.24■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 MCCD1P2-201ENST00000423228 335 ntBASIC15.24■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 RHOQP3-201ENST00000437982 621 ntBASIC15.24■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.24■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.24■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 AL513480.1-201ENST00000451731 511 ntBASIC15.24■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 HLA-J-202ENST00000469281 1241 ntBASIC15.24■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.24■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.24■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.24■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.24■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 CYP2A7P1-201ENST00000595391 815 ntBASIC15.24■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.24■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.24■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.24■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 AC010507.1-201ENST00000633895 436 ntBASIC15.24■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 AC092865.6-201ENST00000642101 219 ntBASIC15.24■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.24■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.24■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.24■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TNFSF12-TNFSF13A0A0A6YY99 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms