Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTCH2Q9Y6C5 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTCH2Q9Y6C5 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
PTCH2Q9Y6C5 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC18.73■□□□□ 0.59
PTCH2Q9Y6C5 TPI1-206ENST00000488464 791 ntTSL 5 BASIC18.73■□□□□ 0.59
PTCH2Q9Y6C5 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC18.73■□□□□ 0.59
PTCH2Q9Y6C5 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.73■□□□□ 0.59
PTCH2Q9Y6C5 AC244093.1-201ENST00000610837 814 ntBASIC18.73■□□□□ 0.59
PTCH2Q9Y6C5 RPS24-214ENST00000613865 538 ntTSL 5 BASIC18.73■□□□□ 0.59
PTCH2Q9Y6C5 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PTCH2Q9Y6C5 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.73■□□□□ 0.59
PTCH2Q9Y6C5 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PTCH2Q9Y6C5 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTCH2Q9Y6C5 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTCH2Q9Y6C5 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PTCH2Q9Y6C5 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.73■□□□□ 0.59
PTCH2Q9Y6C5 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTCH2Q9Y6C5 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.72■□□□□ 0.59
PTCH2Q9Y6C5 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC18.72■□□□□ 0.59
PTCH2Q9Y6C5 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.72■□□□□ 0.59
PTCH2Q9Y6C5 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.72■□□□□ 0.59
PTCH2Q9Y6C5 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.72■□□□□ 0.59
PTCH2Q9Y6C5 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTCH2Q9Y6C5 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
PTCH2Q9Y6C5 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC18.72■□□□□ 0.59
PTCH2Q9Y6C5 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTCH2Q9Y6C5 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTCH2Q9Y6C5 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC18.72■□□□□ 0.59
PTCH2Q9Y6C5 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PTCH2Q9Y6C5 SERBP1P3-201ENST00000459980 809 ntBASIC18.72■□□□□ 0.59
PTCH2Q9Y6C5 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC18.72■□□□□ 0.59
PTCH2Q9Y6C5 PARP8-206ENST00000503665 572 ntTSL 4 BASIC18.72■□□□□ 0.59
PTCH2Q9Y6C5 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.72■□□□□ 0.59
PTCH2Q9Y6C5 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.72■□□□□ 0.59
PTCH2Q9Y6C5 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PTCH2Q9Y6C5 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC18.72■□□□□ 0.59
PTCH2Q9Y6C5 IGHV3OR16-16-201ENST00000563644 343 ntBASIC18.72■□□□□ 0.59
PTCH2Q9Y6C5 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC18.72■□□□□ 0.59
PTCH2Q9Y6C5 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PTCH2Q9Y6C5 MIR4492-201ENST00000581627 80 ntBASIC18.72■□□□□ 0.59
PTCH2Q9Y6C5 AC015936.2-201ENST00000593177 259 ntBASIC18.72■□□□□ 0.59
PTCH2Q9Y6C5 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PTCH2Q9Y6C5 TECR-220ENST00000600083 1204 ntTSL 2 BASIC18.72■□□□□ 0.59
PTCH2Q9Y6C5 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.72■□□□□ 0.59
PTCH2Q9Y6C5 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTCH2Q9Y6C5 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.72■□□□□ 0.59
PTCH2Q9Y6C5 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PTCH2Q9Y6C5 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTCH2Q9Y6C5 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PTCH2Q9Y6C5 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.72■□□□□ 0.59
PTCH2Q9Y6C5 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.72■□□□□ 0.59
PTCH2Q9Y6C5 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PTCH2Q9Y6C5 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTCH2Q9Y6C5 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTCH2Q9Y6C5 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.71■□□□□ 0.59
PTCH2Q9Y6C5 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.71■□□□□ 0.59
PTCH2Q9Y6C5 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.71■□□□□ 0.59
PTCH2Q9Y6C5 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTCH2Q9Y6C5 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTCH2Q9Y6C5 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTCH2Q9Y6C5 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTCH2Q9Y6C5 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
PTCH2Q9Y6C5 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTCH2Q9Y6C5 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTCH2Q9Y6C5 STX1A-203ENST00000395155 783 ntTSL 2 BASIC18.71■□□□□ 0.59
PTCH2Q9Y6C5 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC18.71■□□□□ 0.59
PTCH2Q9Y6C5 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTCH2Q9Y6C5 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
PTCH2Q9Y6C5 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC18.71■□□□□ 0.59
PTCH2Q9Y6C5 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTCH2Q9Y6C5 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC18.71■□□□□ 0.59
PTCH2Q9Y6C5 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC18.71■□□□□ 0.59
PTCH2Q9Y6C5 RETN-203ENST00000629642 400 ntTSL 5 BASIC18.71■□□□□ 0.59
PTCH2Q9Y6C5 NEFHP1-201ENST00000412845 2629 ntBASIC18.71■□□□□ 0.59
PTCH2Q9Y6C5 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTCH2Q9Y6C5 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTCH2Q9Y6C5 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PTCH2Q9Y6C5 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTCH2Q9Y6C5 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.71■□□□□ 0.59
PTCH2Q9Y6C5 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
PTCH2Q9Y6C5 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.71■□□□□ 0.59
PTCH2Q9Y6C5 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PTCH2Q9Y6C5 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PTCH2Q9Y6C5 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PTCH2Q9Y6C5 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
PTCH2Q9Y6C5 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
PTCH2Q9Y6C5 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTCH2Q9Y6C5 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTCH2Q9Y6C5 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.7■□□□□ 0.58
PTCH2Q9Y6C5 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PTCH2Q9Y6C5 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PTCH2Q9Y6C5 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.7■□□□□ 0.58
PTCH2Q9Y6C5 BCL2-203ENST00000589955 5011 ntBASIC18.7■□□□□ 0.58
PTCH2Q9Y6C5 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.7■□□□□ 0.58
PTCH2Q9Y6C5 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PTCH2Q9Y6C5 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.7■□□□□ 0.58
PTCH2Q9Y6C5 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PTCH2Q9Y6C5 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PTCH2Q9Y6C5 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC18.7■□□□□ 0.58
PTCH2Q9Y6C5 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms