Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.95■□□□□ 0.3
RAI2Q9Y5P3 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.95■□□□□ 0.3
RAI2Q9Y5P3 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAI2Q9Y5P3 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAI2Q9Y5P3 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RAI2Q9Y5P3 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAI2Q9Y5P3 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RAI2Q9Y5P3 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.95■□□□□ 0.3
RAI2Q9Y5P3 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAI2Q9Y5P3 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAI2Q9Y5P3 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.95■□□□□ 0.3
RAI2Q9Y5P3 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.95■□□□□ 0.3
RAI2Q9Y5P3 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
RAI2Q9Y5P3 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RAI2Q9Y5P3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 NKILA-202ENST00000614771 2598 ntBASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RAI2Q9Y5P3 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.93■□□□□ 0.3
RAI2Q9Y5P3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAI2Q9Y5P3 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
RAI2Q9Y5P3 AL671710.1-201ENST00000610245 2349 ntBASIC16.93■□□□□ 0.3
RAI2Q9Y5P3 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
RAI2Q9Y5P3 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
RAI2Q9Y5P3 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
RAI2Q9Y5P3 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RAI2Q9Y5P3 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAI2Q9Y5P3 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAI2Q9Y5P3 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RAI2Q9Y5P3 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAI2Q9Y5P3 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RAI2Q9Y5P3 AGGF1P2-201ENST00000426656 2106 ntBASIC16.93■□□□□ 0.3
RAI2Q9Y5P3 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAI2Q9Y5P3 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAI2Q9Y5P3 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RAI2Q9Y5P3 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.93■□□□□ 0.3
RAI2Q9Y5P3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAI2Q9Y5P3 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RAI2Q9Y5P3 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
RAI2Q9Y5P3 SNX33P1-201ENST00000592116 1762 ntBASIC16.93■□□□□ 0.3
RAI2Q9Y5P3 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RAI2Q9Y5P3 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.93■□□□□ 0.3
RAI2Q9Y5P3 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RAI2Q9Y5P3 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAI2Q9Y5P3 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAI2Q9Y5P3 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAI2Q9Y5P3 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.93■□□□□ 0.3
RAI2Q9Y5P3 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RAI2Q9Y5P3 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
RAI2Q9Y5P3 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.93■□□□□ 0.3
RAI2Q9Y5P3 PDPK2P-202ENST00000562415 1191 ntBASIC16.93■□□□□ 0.3
RAI2Q9Y5P3 AC005829.1-201ENST00000570002 483 ntBASIC16.93■□□□□ 0.3
RAI2Q9Y5P3 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.93■□□□□ 0.3
RAI2Q9Y5P3 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.93■□□□□ 0.3
RAI2Q9Y5P3 AL139011.1-202ENST00000642063 584 ntBASIC16.93■□□□□ 0.3
RAI2Q9Y5P3 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms