Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPH3AQ9Y2J0 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPH3AQ9Y2J0 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPH3AQ9Y2J0 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPH3AQ9Y2J0 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
RPH3AQ9Y2J0 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.42■□□□□ 0.06
RPH3AQ9Y2J0 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RPH3AQ9Y2J0 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RPH3AQ9Y2J0 AC080080.1-201ENST00000625121 2420 ntBASIC15.42■□□□□ 0.06
RPH3AQ9Y2J0 AC002310.6-201ENST00000624451 1377 ntBASIC15.42■□□□□ 0.06
RPH3AQ9Y2J0 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPH3AQ9Y2J0 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPH3AQ9Y2J0 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
RPH3AQ9Y2J0 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
RPH3AQ9Y2J0 IGLL3P-201ENST00000412472 434 ntBASIC15.42■□□□□ 0.06
RPH3AQ9Y2J0 AC023274.1-201ENST00000418278 595 ntBASIC15.42■□□□□ 0.06
RPH3AQ9Y2J0 RPS8P6-201ENST00000426177 609 ntBASIC15.42■□□□□ 0.06
RPH3AQ9Y2J0 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.42■□□□□ 0.06
RPH3AQ9Y2J0 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.42■□□□□ 0.06
RPH3AQ9Y2J0 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.42■□□□□ 0.06
RPH3AQ9Y2J0 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.42■□□□□ 0.06
RPH3AQ9Y2J0 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.42■□□□□ 0.06
RPH3AQ9Y2J0 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPH3AQ9Y2J0 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.42■□□□□ 0.06
RPH3AQ9Y2J0 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPH3AQ9Y2J0 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RPH3AQ9Y2J0 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPH3AQ9Y2J0 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPH3AQ9Y2J0 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPH3AQ9Y2J0 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPH3AQ9Y2J0 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPH3AQ9Y2J0 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RPH3AQ9Y2J0 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPH3AQ9Y2J0 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RPH3AQ9Y2J0 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPH3AQ9Y2J0 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RPH3AQ9Y2J0 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.41■□□□□ 0.06
RPH3AQ9Y2J0 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RPH3AQ9Y2J0 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
RPH3AQ9Y2J0 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RPH3AQ9Y2J0 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RPH3AQ9Y2J0 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RPH3AQ9Y2J0 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RPH3AQ9Y2J0 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RPH3AQ9Y2J0 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RPH3AQ9Y2J0 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RPH3AQ9Y2J0 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RPH3AQ9Y2J0 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.41■□□□□ 0.06
RPH3AQ9Y2J0 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RPH3AQ9Y2J0 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.41■□□□□ 0.06
RPH3AQ9Y2J0 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.41■□□□□ 0.06
RPH3AQ9Y2J0 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RPH3AQ9Y2J0 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.41■□□□□ 0.06
RPH3AQ9Y2J0 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
RPH3AQ9Y2J0 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.41■□□□□ 0.06
RPH3AQ9Y2J0 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RPH3AQ9Y2J0 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RPH3AQ9Y2J0 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
RPH3AQ9Y2J0 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.41■□□□□ 0.06
RPH3AQ9Y2J0 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.41■□□□□ 0.06
RPH3AQ9Y2J0 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.41■□□□□ 0.06
RPH3AQ9Y2J0 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.41■□□□□ 0.06
RPH3AQ9Y2J0 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.41■□□□□ 0.06
RPH3AQ9Y2J0 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.41■□□□□ 0.06
RPH3AQ9Y2J0 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RPH3AQ9Y2J0 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
RPH3AQ9Y2J0 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RPH3AQ9Y2J0 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RPH3AQ9Y2J0 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RPH3AQ9Y2J0 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.41■□□□□ 0.06
RPH3AQ9Y2J0 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RPH3AQ9Y2J0 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RPH3AQ9Y2J0 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.41■□□□□ 0.06
RPH3AQ9Y2J0 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RPH3AQ9Y2J0 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RPH3AQ9Y2J0 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
RPH3AQ9Y2J0 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 CXCL1P1-201ENST00000502804 216 ntBASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.4■□□□□ 0.06
RPH3AQ9Y2J0 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms