Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ERGIC3Q9Y282 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.36■□□□□ 0.05
ERGIC3Q9Y282 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
ERGIC3Q9Y282 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
ERGIC3Q9Y282 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ERGIC3Q9Y282 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
ERGIC3Q9Y282 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ERGIC3Q9Y282 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
ERGIC3Q9Y282 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ERGIC3Q9Y282 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.36■□□□□ 0.05
ERGIC3Q9Y282 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ERGIC3Q9Y282 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ERGIC3Q9Y282 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.36■□□□□ 0.05
ERGIC3Q9Y282 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
ERGIC3Q9Y282 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
ERGIC3Q9Y282 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
ERGIC3Q9Y282 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.36■□□□□ 0.05
ERGIC3Q9Y282 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 AL391807.1-203ENST00000604392 2365 ntBASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 AP002414.2-201ENST00000591780 3365 ntBASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 GCSHP5-201ENST00000443090 522 ntBASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 ECEL1P2-202ENST00000465689 757 ntBASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 AC068472.1-201ENST00000474589 881 ntBASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 AL136038.4-201ENST00000603606 1261 ntBASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 AC019129.2-201ENST00000609837 1235 ntBASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ERGIC3Q9Y282 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.34■□□□□ 0.05
ERGIC3Q9Y282 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ERGIC3Q9Y282 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.34■□□□□ 0.05
ERGIC3Q9Y282 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
ERGIC3Q9Y282 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ERGIC3Q9Y282 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ERGIC3Q9Y282 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.34■□□□□ 0.05
ERGIC3Q9Y282 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
ERGIC3Q9Y282 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
ERGIC3Q9Y282 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ERGIC3Q9Y282 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.34■□□□□ 0.05
ERGIC3Q9Y282 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.34■□□□□ 0.05
ERGIC3Q9Y282 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ERGIC3Q9Y282 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.34■□□□□ 0.05
ERGIC3Q9Y282 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
ERGIC3Q9Y282 INGX-201ENST00000359239 846 ntBASIC15.34■□□□□ 0.05
ERGIC3Q9Y282 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ERGIC3Q9Y282 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ERGIC3Q9Y282 MIR718-201ENST00000390190 70 ntBASIC15.34■□□□□ 0.05
ERGIC3Q9Y282 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.34■□□□□ 0.05
ERGIC3Q9Y282 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ERGIC3Q9Y282 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
ERGIC3Q9Y282 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC15.34■□□□□ 0.05
ERGIC3Q9Y282 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.34■□□□□ 0.05
ERGIC3Q9Y282 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC15.34■□□□□ 0.05
ERGIC3Q9Y282 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.34■□□□□ 0.05
ERGIC3Q9Y282 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ERGIC3Q9Y282 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
ERGIC3Q9Y282 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ERGIC3Q9Y282 ME2P1-201ENST00000426028 1970 ntBASIC15.34■□□□□ 0.05
ERGIC3Q9Y282 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ERGIC3Q9Y282 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms