Protein–RNA interactions for Protein: Q9UPR3

SMG5, Protein SMG5, humanhuman

Known RBP Predictions only

Length 1,016 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5Q9UPR3 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SMG5Q9UPR3 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SMG5Q9UPR3 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMG5Q9UPR3 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SMG5Q9UPR3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMG5Q9UPR3 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
SMG5Q9UPR3 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.66■□□□□ 0.42
SMG5Q9UPR3 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMG5Q9UPR3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SMG5Q9UPR3 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.65■□□□□ 0.42
SMG5Q9UPR3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.65■□□□□ 0.42
SMG5Q9UPR3 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMG5Q9UPR3 SIGLEC16-201ENST00000599858 1437 ntBASIC17.65■□□□□ 0.42
SMG5Q9UPR3 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.65■□□□□ 0.42
SMG5Q9UPR3 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMG5Q9UPR3 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMG5Q9UPR3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.65■□□□□ 0.42
SMG5Q9UPR3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMG5Q9UPR3 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMG5Q9UPR3 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMG5Q9UPR3 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMG5Q9UPR3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMG5Q9UPR3 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
SMG5Q9UPR3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMG5Q9UPR3 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.65■□□□□ 0.42
SMG5Q9UPR3 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMG5Q9UPR3 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
SMG5Q9UPR3 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMG5Q9UPR3 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.65■□□□□ 0.42
SMG5Q9UPR3 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.65■□□□□ 0.42
SMG5Q9UPR3 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SMG5Q9UPR3 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.65■□□□□ 0.42
SMG5Q9UPR3 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMG5Q9UPR3 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SMG5Q9UPR3 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMG5Q9UPR3 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.65■□□□□ 0.42
SMG5Q9UPR3 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.65■□□□□ 0.42
SMG5Q9UPR3 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMG5Q9UPR3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
SMG5Q9UPR3 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMG5Q9UPR3 KRT8P47-201ENST00000604727 1398 ntBASIC17.65■□□□□ 0.42
SMG5Q9UPR3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.65■□□□□ 0.42
SMG5Q9UPR3 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SMG5Q9UPR3 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SMG5Q9UPR3 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.64■□□□□ 0.42
SMG5Q9UPR3 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SMG5Q9UPR3 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.64■□□□□ 0.42
SMG5Q9UPR3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SMG5Q9UPR3 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMG5Q9UPR3 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMG5Q9UPR3 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SMG5Q9UPR3 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.64■□□□□ 0.41
SMG5Q9UPR3 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.64■□□□□ 0.41
SMG5Q9UPR3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SMG5Q9UPR3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.64■□□□□ 0.41
SMG5Q9UPR3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SMG5Q9UPR3 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMG5Q9UPR3 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMG5Q9UPR3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
SMG5Q9UPR3 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
SMG5Q9UPR3 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SMG5Q9UPR3 SPDYE21P-201ENST00000413323 827 ntBASIC17.64■□□□□ 0.41
SMG5Q9UPR3 FAM58CP-201ENST00000435741 640 ntBASIC17.64■□□□□ 0.41
SMG5Q9UPR3 ACTG1P14-201ENST00000446382 1122 ntBASIC17.64■□□□□ 0.41
SMG5Q9UPR3 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SMG5Q9UPR3 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMG5Q9UPR3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.64■□□□□ 0.41
SMG5Q9UPR3 AC005498.2-205ENST00000593218 784 ntBASIC17.64■□□□□ 0.41
SMG5Q9UPR3 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SMG5Q9UPR3 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.64■□□□□ 0.41
SMG5Q9UPR3 AC004835.2-201ENST00000603762 682 ntBASIC17.64■□□□□ 0.41
SMG5Q9UPR3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
SMG5Q9UPR3 AC004706.3-202ENST00000621574 984 ntBASIC17.64■□□□□ 0.41
SMG5Q9UPR3 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.64■□□□□ 0.41
SMG5Q9UPR3 AC006504.4-201ENST00000592118 1568 ntBASIC17.64■□□□□ 0.41
SMG5Q9UPR3 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMG5Q9UPR3 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMG5Q9UPR3 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMG5Q9UPR3 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
SMG5Q9UPR3 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SMG5Q9UPR3 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.64■□□□□ 0.41
SMG5Q9UPR3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMG5Q9UPR3 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.64■□□□□ 0.41
SMG5Q9UPR3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SMG5Q9UPR3 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMG5Q9UPR3 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.63■□□□□ 0.41
SMG5Q9UPR3 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SMG5Q9UPR3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.63■□□□□ 0.41
SMG5Q9UPR3 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMG5Q9UPR3 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMG5Q9UPR3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SMG5Q9UPR3 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMG5Q9UPR3 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SMG5Q9UPR3 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMG5Q9UPR3 BX276092.7-203ENST00000637198 1536 ntBASIC17.63■□□□□ 0.41
SMG5Q9UPR3 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SMG5Q9UPR3 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMG5Q9UPR3 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMG5Q9UPR3 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SMG5Q9UPR3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms