Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.27■□□□□ 0.68
USP25Q9UHP3 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
USP25Q9UHP3 FICD-205ENST00000552758 603 ntTSL 2 BASIC19.27■□□□□ 0.68
USP25Q9UHP3 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC19.27■□□□□ 0.68
USP25Q9UHP3 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.27■□□□□ 0.68
USP25Q9UHP3 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
USP25Q9UHP3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.27■□□□□ 0.68
USP25Q9UHP3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC19.27■□□□□ 0.68
USP25Q9UHP3 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
USP25Q9UHP3 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
USP25Q9UHP3 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
USP25Q9UHP3 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.67
USP25Q9UHP3 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
USP25Q9UHP3 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
USP25Q9UHP3 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
USP25Q9UHP3 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
USP25Q9UHP3 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
USP25Q9UHP3 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
USP25Q9UHP3 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP25Q9UHP3 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP25Q9UHP3 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
USP25Q9UHP3 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP25Q9UHP3 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
USP25Q9UHP3 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP25Q9UHP3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP25Q9UHP3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC19.26■□□□□ 0.67
USP25Q9UHP3 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP25Q9UHP3 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC19.26■□□□□ 0.67
USP25Q9UHP3 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC19.26■□□□□ 0.67
USP25Q9UHP3 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP25Q9UHP3 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP25Q9UHP3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP25Q9UHP3 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP25Q9UHP3 CASK-202ENST00000378158 3848 ntTSL 5 BASIC19.26■□□□□ 0.67
USP25Q9UHP3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP25Q9UHP3 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.26■□□□□ 0.67
USP25Q9UHP3 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP25Q9UHP3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP25Q9UHP3 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP25Q9UHP3 PRYP5-201ENST00000451909 266 ntBASIC19.26■□□□□ 0.67
USP25Q9UHP3 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.26■□□□□ 0.67
USP25Q9UHP3 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.26■□□□□ 0.67
USP25Q9UHP3 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.26■□□□□ 0.67
USP25Q9UHP3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
USP25Q9UHP3 AL591684.3-201ENST00000605187 298 ntBASIC19.26■□□□□ 0.67
USP25Q9UHP3 AC010331.1-201ENST00000611423 582 ntBASIC19.26■□□□□ 0.67
USP25Q9UHP3 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP25Q9UHP3 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC19.26■□□□□ 0.67
USP25Q9UHP3 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
USP25Q9UHP3 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.26■□□□□ 0.67
USP25Q9UHP3 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP25Q9UHP3 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
USP25Q9UHP3 AC097637.2-201ENST00000624096 1997 ntBASIC19.26■□□□□ 0.67
USP25Q9UHP3 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP25Q9UHP3 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP25Q9UHP3 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC19.26■□□□□ 0.67
USP25Q9UHP3 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP25Q9UHP3 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP25Q9UHP3 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP25Q9UHP3 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP25Q9UHP3 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP25Q9UHP3 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP25Q9UHP3 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP25Q9UHP3 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP25Q9UHP3 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP25Q9UHP3 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP25Q9UHP3 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP25Q9UHP3 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP25Q9UHP3 AC092384.3-202ENST00000564646 2873 ntBASIC19.25■□□□□ 0.67
USP25Q9UHP3 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP25Q9UHP3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.25■□□□□ 0.67
USP25Q9UHP3 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
USP25Q9UHP3 AL391256.1-201ENST00000443260 1855 ntBASIC19.25■□□□□ 0.67
USP25Q9UHP3 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC19.25■□□□□ 0.67
USP25Q9UHP3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP25Q9UHP3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP25Q9UHP3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.25■□□□□ 0.67
USP25Q9UHP3 KRT18P35-201ENST00000510488 1269 ntBASIC19.25■□□□□ 0.67
USP25Q9UHP3 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.25■□□□□ 0.67
USP25Q9UHP3 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.25■□□□□ 0.67
USP25Q9UHP3 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.25■□□□□ 0.67
USP25Q9UHP3 AC092119.3-201ENST00000612618 583 ntBASIC19.25■□□□□ 0.67
USP25Q9UHP3 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
USP25Q9UHP3 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP25Q9UHP3 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC19.25■□□□□ 0.67
USP25Q9UHP3 AC004817.3-201ENST00000602957 2129 ntBASIC19.25■□□□□ 0.67
USP25Q9UHP3 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC19.25■□□□□ 0.67
USP25Q9UHP3 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP25Q9UHP3 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP25Q9UHP3 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP25Q9UHP3 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP25Q9UHP3 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP25Q9UHP3 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP25Q9UHP3 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP25Q9UHP3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP25Q9UHP3 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP25Q9UHP3 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC19.24■□□□□ 0.67
USP25Q9UHP3 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
USP25Q9UHP3 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP25Q9UHP3 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms