Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AL627223.1-201ENST00000416693 442 ntBASIC18.93■□□□□ 0.62
HDAC6Q9UBN7 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.93■□□□□ 0.62
HDAC6Q9UBN7 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
HDAC6Q9UBN7 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.93■□□□□ 0.62
HDAC6Q9UBN7 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
HDAC6Q9UBN7 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC18.93■□□□□ 0.62
HDAC6Q9UBN7 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.93■□□□□ 0.62
HDAC6Q9UBN7 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.93■□□□□ 0.62
HDAC6Q9UBN7 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
HDAC6Q9UBN7 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HDAC6Q9UBN7 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HDAC6Q9UBN7 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
HDAC6Q9UBN7 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HDAC6Q9UBN7 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.93■□□□□ 0.62
HDAC6Q9UBN7 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.93■□□□□ 0.62
HDAC6Q9UBN7 OR6D1P-202ENST00000641007 5290 ntBASIC18.93■□□□□ 0.62
HDAC6Q9UBN7 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.93■□□□□ 0.62
HDAC6Q9UBN7 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.92■□□□□ 0.62
HDAC6Q9UBN7 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
HDAC6Q9UBN7 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HDAC6Q9UBN7 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.92■□□□□ 0.62
HDAC6Q9UBN7 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HDAC6Q9UBN7 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
HDAC6Q9UBN7 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.92■□□□□ 0.62
HDAC6Q9UBN7 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HDAC6Q9UBN7 SPDYE11-202ENST00000450699 704 ntBASIC18.92■□□□□ 0.62
HDAC6Q9UBN7 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.92■□□□□ 0.62
HDAC6Q9UBN7 SPDYE9P-201ENST00000570642 692 ntBASIC18.92■□□□□ 0.62
HDAC6Q9UBN7 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
HDAC6Q9UBN7 SPDYE10P-202ENST00000612005 668 ntBASIC18.92■□□□□ 0.62
HDAC6Q9UBN7 SPDYE8P-202ENST00000612377 668 ntBASIC18.92■□□□□ 0.62
HDAC6Q9UBN7 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.92■□□□□ 0.62
HDAC6Q9UBN7 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
HDAC6Q9UBN7 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HDAC6Q9UBN7 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HDAC6Q9UBN7 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.92■□□□□ 0.62
HDAC6Q9UBN7 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HDAC6Q9UBN7 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
HDAC6Q9UBN7 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.92■□□□□ 0.62
HDAC6Q9UBN7 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HDAC6Q9UBN7 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HDAC6Q9UBN7 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.92■□□□□ 0.62
HDAC6Q9UBN7 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HDAC6Q9UBN7 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC6Q9UBN7 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC6Q9UBN7 AC060834.1-201ENST00000443027 2032 ntBASIC18.91■□□□□ 0.62
HDAC6Q9UBN7 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC6Q9UBN7 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC18.91■□□□□ 0.62
HDAC6Q9UBN7 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC6Q9UBN7 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
HDAC6Q9UBN7 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC6Q9UBN7 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.91■□□□□ 0.62
HDAC6Q9UBN7 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC6Q9UBN7 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC6Q9UBN7 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC6Q9UBN7 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
HDAC6Q9UBN7 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC6Q9UBN7 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
HDAC6Q9UBN7 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC6Q9UBN7 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.91■□□□□ 0.62
HDAC6Q9UBN7 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.91■□□□□ 0.62
HDAC6Q9UBN7 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
HDAC6Q9UBN7 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.91■□□□□ 0.62
HDAC6Q9UBN7 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.91■□□□□ 0.62
HDAC6Q9UBN7 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.91■□□□□ 0.62
HDAC6Q9UBN7 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.91■□□□□ 0.62
HDAC6Q9UBN7 FAM86C2P-203ENST00000528684 1004 ntBASIC18.91■□□□□ 0.62
HDAC6Q9UBN7 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.91■□□□□ 0.62
HDAC6Q9UBN7 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC6Q9UBN7 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC6Q9UBN7 MIR4515-201ENST00000584082 81 ntBASIC18.91■□□□□ 0.62
HDAC6Q9UBN7 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC6Q9UBN7 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.91■□□□□ 0.62
HDAC6Q9UBN7 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.91■□□□□ 0.62
HDAC6Q9UBN7 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC6Q9UBN7 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC6Q9UBN7 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC6Q9UBN7 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.91■□□□□ 0.62
HDAC6Q9UBN7 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC6Q9UBN7 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC6Q9UBN7 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC6Q9UBN7 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC6Q9UBN7 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.91■□□□□ 0.62
HDAC6Q9UBN7 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HDAC6Q9UBN7 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
HDAC6Q9UBN7 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
HDAC6Q9UBN7 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
HDAC6Q9UBN7 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HDAC6Q9UBN7 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HDAC6Q9UBN7 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HDAC6Q9UBN7 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HDAC6Q9UBN7 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HDAC6Q9UBN7 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HDAC6Q9UBN7 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HDAC6Q9UBN7 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
HDAC6Q9UBN7 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HDAC6Q9UBN7 AC005237.2-201ENST00000434368 219 ntBASIC18.9■□□□□ 0.62
HDAC6Q9UBN7 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.9■□□□□ 0.62
HDAC6Q9UBN7 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
HDAC6Q9UBN7 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms