Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GCM1Q9NP62 DUX4L17-201ENST00000557360 1267 ntBASIC14.35□□□□□ -0.11
GCM1Q9NP62 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.35□□□□□ -0.11
GCM1Q9NP62 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GCM1Q9NP62 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GCM1Q9NP62 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
GCM1Q9NP62 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GCM1Q9NP62 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
GCM1Q9NP62 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GCM1Q9NP62 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.35□□□□□ -0.11
GCM1Q9NP62 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
GCM1Q9NP62 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GCM1Q9NP62 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GCM1Q9NP62 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GCM1Q9NP62 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
GCM1Q9NP62 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GCM1Q9NP62 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
GCM1Q9NP62 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.35□□□□□ -0.11
GCM1Q9NP62 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GCM1Q9NP62 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GCM1Q9NP62 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GCM1Q9NP62 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.34□□□□□ -0.11
GCM1Q9NP62 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
GCM1Q9NP62 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
GCM1Q9NP62 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
GCM1Q9NP62 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
GCM1Q9NP62 AC060834.1-201ENST00000443027 2032 ntBASIC14.34□□□□□ -0.11
GCM1Q9NP62 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.34□□□□□ -0.11
GCM1Q9NP62 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.34□□□□□ -0.11
GCM1Q9NP62 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GCM1Q9NP62 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.34□□□□□ -0.11
GCM1Q9NP62 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
GCM1Q9NP62 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GCM1Q9NP62 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GCM1Q9NP62 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
GCM1Q9NP62 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GCM1Q9NP62 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GCM1Q9NP62 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GCM1Q9NP62 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.34□□□□□ -0.11
GCM1Q9NP62 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
GCM1Q9NP62 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
GCM1Q9NP62 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
GCM1Q9NP62 IGLL3P-201ENST00000412472 434 ntBASIC14.34□□□□□ -0.11
GCM1Q9NP62 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.34□□□□□ -0.11
GCM1Q9NP62 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
GCM1Q9NP62 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC14.34□□□□□ -0.11
GCM1Q9NP62 CXCL1P1-201ENST00000502804 216 ntBASIC14.34□□□□□ -0.11
GCM1Q9NP62 POLD2P1-201ENST00000511220 997 ntBASIC14.34□□□□□ -0.11
GCM1Q9NP62 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GCM1Q9NP62 AC107918.2-201ENST00000530817 355 ntBASIC14.34□□□□□ -0.11
GCM1Q9NP62 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
GCM1Q9NP62 REXO1L3P-201ENST00000622202 1288 ntBASIC14.34□□□□□ -0.11
GCM1Q9NP62 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GCM1Q9NP62 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
GCM1Q9NP62 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.34□□□□□ -0.11
GCM1Q9NP62 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GCM1Q9NP62 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
GCM1Q9NP62 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GCM1Q9NP62 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.34□□□□□ -0.11
GCM1Q9NP62 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GCM1Q9NP62 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GCM1Q9NP62 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GCM1Q9NP62 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GCM1Q9NP62 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
GCM1Q9NP62 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
GCM1Q9NP62 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
GCM1Q9NP62 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.34□□□□□ -0.11
GCM1Q9NP62 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
GCM1Q9NP62 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
GCM1Q9NP62 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GCM1Q9NP62 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
GCM1Q9NP62 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
GCM1Q9NP62 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.34□□□□□ -0.11
GCM1Q9NP62 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
GCM1Q9NP62 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
GCM1Q9NP62 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
GCM1Q9NP62 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
GCM1Q9NP62 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.33□□□□□ -0.11
GCM1Q9NP62 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
GCM1Q9NP62 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.11
GCM1Q9NP62 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
GCM1Q9NP62 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
GCM1Q9NP62 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
GCM1Q9NP62 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
GCM1Q9NP62 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GCM1Q9NP62 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC14.33□□□□□ -0.12
GCM1Q9NP62 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
GCM1Q9NP62 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.33□□□□□ -0.12
GCM1Q9NP62 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GCM1Q9NP62 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GCM1Q9NP62 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
GCM1Q9NP62 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GCM1Q9NP62 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
GCM1Q9NP62 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.33□□□□□ -0.12
GCM1Q9NP62 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.33□□□□□ -0.12
GCM1Q9NP62 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.33□□□□□ -0.12
GCM1Q9NP62 FAM185BP-201ENST00000443595 716 ntBASIC14.33□□□□□ -0.12
GCM1Q9NP62 KRT18P2-201ENST00000447938 1258 ntBASIC14.33□□□□□ -0.12
GCM1Q9NP62 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.33□□□□□ -0.12
GCM1Q9NP62 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms