Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
ATP13A1Q9HD20 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP13A1Q9HD20 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATP13A1Q9HD20 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ATP13A1Q9HD20 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.15■□□□□ 0.34
ATP13A1Q9HD20 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
ATP13A1Q9HD20 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
ATP13A1Q9HD20 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.34
ATP13A1Q9HD20 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.14■□□□□ 0.33
ATP13A1Q9HD20 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ATP13A1Q9HD20 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP13A1Q9HD20 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP13A1Q9HD20 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP13A1Q9HD20 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ATP13A1Q9HD20 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP13A1Q9HD20 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.14■□□□□ 0.33
ATP13A1Q9HD20 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.14■□□□□ 0.33
ATP13A1Q9HD20 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ATP13A1Q9HD20 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP13A1Q9HD20 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ATP13A1Q9HD20 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.14■□□□□ 0.33
ATP13A1Q9HD20 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.14■□□□□ 0.33
ATP13A1Q9HD20 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.14■□□□□ 0.33
ATP13A1Q9HD20 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC17.14■□□□□ 0.33
ATP13A1Q9HD20 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.14■□□□□ 0.33
ATP13A1Q9HD20 AC112191.1-201ENST00000523689 701 ntBASIC17.14■□□□□ 0.33
ATP13A1Q9HD20 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.14■□□□□ 0.33
ATP13A1Q9HD20 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.14■□□□□ 0.33
ATP13A1Q9HD20 AL031055.1-201ENST00000606362 631 ntBASIC17.14■□□□□ 0.33
ATP13A1Q9HD20 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.14■□□□□ 0.33
ATP13A1Q9HD20 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
ATP13A1Q9HD20 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.14■□□□□ 0.33
ATP13A1Q9HD20 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
ATP13A1Q9HD20 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
ATP13A1Q9HD20 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ATP13A1Q9HD20 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP13A1Q9HD20 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.14■□□□□ 0.33
ATP13A1Q9HD20 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP13A1Q9HD20 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
ATP13A1Q9HD20 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP13A1Q9HD20 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP13A1Q9HD20 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
ATP13A1Q9HD20 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.14■□□□□ 0.33
ATP13A1Q9HD20 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ATP13A1Q9HD20 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
ATP13A1Q9HD20 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.14■□□□□ 0.33
ATP13A1Q9HD20 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ATP13A1Q9HD20 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP13A1Q9HD20 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
ATP13A1Q9HD20 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP13A1Q9HD20 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.13■□□□□ 0.33
ATP13A1Q9HD20 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATP13A1Q9HD20 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATP13A1Q9HD20 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATP13A1Q9HD20 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATP13A1Q9HD20 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATP13A1Q9HD20 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATP13A1Q9HD20 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
ATP13A1Q9HD20 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP13A1Q9HD20 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP13A1Q9HD20 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.13■□□□□ 0.33
ATP13A1Q9HD20 RNU1-129P-201ENST00000384064 167 ntBASIC17.13■□□□□ 0.33
ATP13A1Q9HD20 AC002056.1-201ENST00000395613 760 ntBASIC17.13■□□□□ 0.33
ATP13A1Q9HD20 MKNK2P1-201ENST00000437526 628 ntBASIC17.13■□□□□ 0.33
ATP13A1Q9HD20 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATP13A1Q9HD20 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.13■□□□□ 0.33
ATP13A1Q9HD20 U1.21-201ENST00000580816 167 ntBASIC17.13■□□□□ 0.33
ATP13A1Q9HD20 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.13■□□□□ 0.33
ATP13A1Q9HD20 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATP13A1Q9HD20 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.13■□□□□ 0.33
ATP13A1Q9HD20 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP13A1Q9HD20 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP13A1Q9HD20 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP13A1Q9HD20 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
ATP13A1Q9HD20 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.13■□□□□ 0.33
ATP13A1Q9HD20 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.13■□□□□ 0.33
ATP13A1Q9HD20 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP13A1Q9HD20 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.13■□□□□ 0.33
ATP13A1Q9HD20 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP13A1Q9HD20 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ATP13A1Q9HD20 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.13■□□□□ 0.33
ATP13A1Q9HD20 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ATP13A1Q9HD20 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP13A1Q9HD20 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP13A1Q9HD20 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP13A1Q9HD20 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP13A1Q9HD20 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP13A1Q9HD20 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP13A1Q9HD20 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP13A1Q9HD20 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP13A1Q9HD20 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP13A1Q9HD20 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ATP13A1Q9HD20 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.12■□□□□ 0.33
ATP13A1Q9HD20 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP13A1Q9HD20 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP13A1Q9HD20 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP13A1Q9HD20 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP13A1Q9HD20 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP13A1Q9HD20 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ATP13A1Q9HD20 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms