Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 AC124067.4-201ENST00000519691 2379 ntBASIC17.64■□□□□ 0.41
LHX5Q9H2C1 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
LHX5Q9H2C1 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.64■□□□□ 0.41
LHX5Q9H2C1 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
LHX5Q9H2C1 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.64■□□□□ 0.41
LHX5Q9H2C1 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.64■□□□□ 0.41
LHX5Q9H2C1 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LHX5Q9H2C1 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.64■□□□□ 0.41
LHX5Q9H2C1 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.64■□□□□ 0.41
LHX5Q9H2C1 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
LHX5Q9H2C1 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.64■□□□□ 0.41
LHX5Q9H2C1 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
LHX5Q9H2C1 KRT19P2-202ENST00000557173 1012 ntBASIC17.64■□□□□ 0.41
LHX5Q9H2C1 AC018845.2-201ENST00000568326 409 ntBASIC17.64■□□□□ 0.41
LHX5Q9H2C1 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.64■□□□□ 0.41
LHX5Q9H2C1 AL031055.1-201ENST00000606362 631 ntBASIC17.64■□□□□ 0.41
LHX5Q9H2C1 AC021097.1-201ENST00000607902 574 ntBASIC17.64■□□□□ 0.41
LHX5Q9H2C1 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.64■□□□□ 0.41
LHX5Q9H2C1 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LHX5Q9H2C1 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LHX5Q9H2C1 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.64■□□□□ 0.41
LHX5Q9H2C1 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LHX5Q9H2C1 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.64■□□□□ 0.41
LHX5Q9H2C1 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LHX5Q9H2C1 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LHX5Q9H2C1 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LHX5Q9H2C1 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LHX5Q9H2C1 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
LHX5Q9H2C1 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LHX5Q9H2C1 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LHX5Q9H2C1 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.63■□□□□ 0.41
LHX5Q9H2C1 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LHX5Q9H2C1 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LHX5Q9H2C1 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LHX5Q9H2C1 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
LHX5Q9H2C1 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
LHX5Q9H2C1 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.63■□□□□ 0.41
LHX5Q9H2C1 ALOX12P2-203ENST00000570921 1945 ntBASIC17.63■□□□□ 0.41
LHX5Q9H2C1 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LHX5Q9H2C1 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LHX5Q9H2C1 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LHX5Q9H2C1 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LHX5Q9H2C1 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LHX5Q9H2C1 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LHX5Q9H2C1 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.63■□□□□ 0.41
LHX5Q9H2C1 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.63■□□□□ 0.41
LHX5Q9H2C1 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.63■□□□□ 0.41
LHX5Q9H2C1 AC109635.5-201ENST00000533593 962 ntBASIC17.63■□□□□ 0.41
LHX5Q9H2C1 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.63■□□□□ 0.41
LHX5Q9H2C1 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.63■□□□□ 0.41
LHX5Q9H2C1 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.63■□□□□ 0.41
LHX5Q9H2C1 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LHX5Q9H2C1 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LHX5Q9H2C1 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.63■□□□□ 0.41
LHX5Q9H2C1 BCAR1-209ENST00000546196 1340 ntBASIC17.63■□□□□ 0.41
LHX5Q9H2C1 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LHX5Q9H2C1 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LHX5Q9H2C1 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
LHX5Q9H2C1 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
LHX5Q9H2C1 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LHX5Q9H2C1 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.62■□□□□ 0.41
LHX5Q9H2C1 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
LHX5Q9H2C1 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
LHX5Q9H2C1 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LHX5Q9H2C1 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.62■□□□□ 0.41
LHX5Q9H2C1 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LHX5Q9H2C1 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LHX5Q9H2C1 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LHX5Q9H2C1 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
LHX5Q9H2C1 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LHX5Q9H2C1 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LHX5Q9H2C1 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
LHX5Q9H2C1 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.62■□□□□ 0.41
LHX5Q9H2C1 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LHX5Q9H2C1 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
LHX5Q9H2C1 AC140658.5-201ENST00000438532 169 ntBASIC17.62■□□□□ 0.41
LHX5Q9H2C1 DNAJB3-201ENST00000446806 729 ntBASIC17.62■□□□□ 0.41
LHX5Q9H2C1 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LHX5Q9H2C1 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LHX5Q9H2C1 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.62■□□□□ 0.41
LHX5Q9H2C1 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
LHX5Q9H2C1 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.62■□□□□ 0.41
LHX5Q9H2C1 AC010327.4-202ENST00000591484 748 ntBASIC17.62■□□□□ 0.41
LHX5Q9H2C1 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.62■□□□□ 0.41
LHX5Q9H2C1 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.62■□□□□ 0.41
LHX5Q9H2C1 AC020765.3-201ENST00000613051 740 ntBASIC17.62■□□□□ 0.41
LHX5Q9H2C1 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LHX5Q9H2C1 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
LHX5Q9H2C1 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.62■□□□□ 0.41
LHX5Q9H2C1 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
LHX5Q9H2C1 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LHX5Q9H2C1 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.62■□□□□ 0.41
LHX5Q9H2C1 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.62■□□□□ 0.41
LHX5Q9H2C1 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.62■□□□□ 0.41
LHX5Q9H2C1 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
LHX5Q9H2C1 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LHX5Q9H2C1 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LHX5Q9H2C1 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LHX5Q9H2C1 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LHX5Q9H2C1 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms