Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
FOXP3Q9BZS1 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXP3Q9BZS1 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
FOXP3Q9BZS1 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
FOXP3Q9BZS1 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.34■□□□□ 0.37
FOXP3Q9BZS1 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXP3Q9BZS1 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXP3Q9BZS1 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.34■□□□□ 0.37
FOXP3Q9BZS1 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXP3Q9BZS1 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXP3Q9BZS1 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXP3Q9BZS1 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXP3Q9BZS1 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXP3Q9BZS1 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXP3Q9BZS1 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FOXP3Q9BZS1 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FOXP3Q9BZS1 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXP3Q9BZS1 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.34■□□□□ 0.37
FOXP3Q9BZS1 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
FOXP3Q9BZS1 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXP3Q9BZS1 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXP3Q9BZS1 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FOXP3Q9BZS1 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
FOXP3Q9BZS1 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FOXP3Q9BZS1 AC073648.2-201ENST00000510116 352 ntBASIC17.34■□□□□ 0.37
FOXP3Q9BZS1 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.34■□□□□ 0.37
FOXP3Q9BZS1 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.34■□□□□ 0.37
FOXP3Q9BZS1 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.34■□□□□ 0.37
FOXP3Q9BZS1 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FOXP3Q9BZS1 AP001269.4-201ENST00000609611 512 ntBASIC17.34■□□□□ 0.37
FOXP3Q9BZS1 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.34■□□□□ 0.37
FOXP3Q9BZS1 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
FOXP3Q9BZS1 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FOXP3Q9BZS1 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FOXP3Q9BZS1 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.34■□□□□ 0.37
FOXP3Q9BZS1 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
FOXP3Q9BZS1 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
FOXP3Q9BZS1 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
FOXP3Q9BZS1 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
FOXP3Q9BZS1 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
FOXP3Q9BZS1 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
FOXP3Q9BZS1 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
FOXP3Q9BZS1 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
FOXP3Q9BZS1 PMPCAP1-201ENST00000508114 1576 ntBASIC17.33■□□□□ 0.37
FOXP3Q9BZS1 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
FOXP3Q9BZS1 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
FOXP3Q9BZS1 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.33■□□□□ 0.36
FOXP3Q9BZS1 KRT8P49-201ENST00000604166 1432 ntBASIC17.33■□□□□ 0.36
FOXP3Q9BZS1 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FOXP3Q9BZS1 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
FOXP3Q9BZS1 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.33■□□□□ 0.36
FOXP3Q9BZS1 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.33■□□□□ 0.36
FOXP3Q9BZS1 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FOXP3Q9BZS1 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.33■□□□□ 0.36
FOXP3Q9BZS1 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.33■□□□□ 0.36
FOXP3Q9BZS1 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.33■□□□□ 0.36
FOXP3Q9BZS1 AC018712.1-201ENST00000455767 687 ntBASIC17.33■□□□□ 0.36
FOXP3Q9BZS1 FGFR3P6-201ENST00000457012 610 ntBASIC17.33■□□□□ 0.36
FOXP3Q9BZS1 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.33■□□□□ 0.36
FOXP3Q9BZS1 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.33■□□□□ 0.36
FOXP3Q9BZS1 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.33■□□□□ 0.36
FOXP3Q9BZS1 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.33■□□□□ 0.36
FOXP3Q9BZS1 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FOXP3Q9BZS1 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FOXP3Q9BZS1 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
FOXP3Q9BZS1 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
FOXP3Q9BZS1 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
FOXP3Q9BZS1 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FOXP3Q9BZS1 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
FOXP3Q9BZS1 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
FOXP3Q9BZS1 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FOXP3Q9BZS1 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
FOXP3Q9BZS1 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.32■□□□□ 0.36
FOXP3Q9BZS1 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FOXP3Q9BZS1 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FOXP3Q9BZS1 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FOXP3Q9BZS1 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.32■□□□□ 0.36
FOXP3Q9BZS1 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FOXP3Q9BZS1 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
FOXP3Q9BZS1 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.32■□□□□ 0.36
FOXP3Q9BZS1 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
FOXP3Q9BZS1 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
FOXP3Q9BZS1 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
FOXP3Q9BZS1 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
FOXP3Q9BZS1 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FOXP3Q9BZS1 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.32■□□□□ 0.36
FOXP3Q9BZS1 AC092364.2-201ENST00000596710 2692 ntBASIC17.32■□□□□ 0.36
FOXP3Q9BZS1 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.32■□□□□ 0.36
FOXP3Q9BZS1 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FOXP3Q9BZS1 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FOXP3Q9BZS1 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FOXP3Q9BZS1 MIR940-201ENST00000401276 94 ntBASIC17.32■□□□□ 0.36
FOXP3Q9BZS1 AL020989.1-201ENST00000422979 469 ntBASIC17.32■□□□□ 0.36
FOXP3Q9BZS1 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.32■□□□□ 0.36
FOXP3Q9BZS1 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.32■□□□□ 0.36
FOXP3Q9BZS1 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.32■□□□□ 0.36
FOXP3Q9BZS1 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
FOXP3Q9BZS1 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.32■□□□□ 0.36
FOXP3Q9BZS1 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.32■□□□□ 0.36
FOXP3Q9BZS1 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms