Protein–RNA interactions for Protein: Q9BW85

CCDC94, Coiled-coil domain-containing protein 94, humanhuman

Predicted RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC94Q9BW85 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CCDC94Q9BW85 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC94Q9BW85 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC94Q9BW85 FAM215A-202ENST00000632077 792 ntBASIC19.07■□□□□ 0.64
CCDC94Q9BW85 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC94Q9BW85 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC19.07■□□□□ 0.64
CCDC94Q9BW85 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC94Q9BW85 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC94Q9BW85 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CCDC94Q9BW85 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
CCDC94Q9BW85 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC94Q9BW85 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CCDC94Q9BW85 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CCDC94Q9BW85 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC94Q9BW85 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC94Q9BW85 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC94Q9BW85 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC94Q9BW85 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC94Q9BW85 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC94Q9BW85 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC94Q9BW85 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC94Q9BW85 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC94Q9BW85 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC94Q9BW85 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CCDC94Q9BW85 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC94Q9BW85 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC94Q9BW85 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
CCDC94Q9BW85 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC94Q9BW85 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.06■□□□□ 0.64
CCDC94Q9BW85 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC94Q9BW85 AC005104.2-201ENST00000427818 678 ntBASIC19.06■□□□□ 0.64
CCDC94Q9BW85 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.06■□□□□ 0.64
CCDC94Q9BW85 PRYP5-201ENST00000451909 266 ntBASIC19.06■□□□□ 0.64
CCDC94Q9BW85 STK19B-204ENST00000512515 211 ntBASIC19.06■□□□□ 0.64
CCDC94Q9BW85 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC94Q9BW85 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC19.06■□□□□ 0.64
CCDC94Q9BW85 STK25P1-201ENST00000585406 838 ntBASIC19.06■□□□□ 0.64
CCDC94Q9BW85 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC94Q9BW85 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC94Q9BW85 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.06■□□□□ 0.64
CCDC94Q9BW85 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.06■□□□□ 0.64
CCDC94Q9BW85 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC94Q9BW85 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC19.06■□□□□ 0.64
CCDC94Q9BW85 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC94Q9BW85 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CCDC94Q9BW85 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC94Q9BW85 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC94Q9BW85 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC94Q9BW85 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCDC94Q9BW85 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
CCDC94Q9BW85 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC94Q9BW85 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC94Q9BW85 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC94Q9BW85 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC94Q9BW85 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC94Q9BW85 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC94Q9BW85 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC94Q9BW85 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC94Q9BW85 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC94Q9BW85 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC94Q9BW85 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC94Q9BW85 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC94Q9BW85 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CCDC94Q9BW85 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC94Q9BW85 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC94Q9BW85 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC94Q9BW85 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.05■□□□□ 0.64
CCDC94Q9BW85 SIGLEC30P-201ENST00000455569 941 ntBASIC19.05■□□□□ 0.64
CCDC94Q9BW85 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CCDC94Q9BW85 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC94Q9BW85 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.05■□□□□ 0.64
CCDC94Q9BW85 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CCDC94Q9BW85 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC94Q9BW85 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.05■□□□□ 0.64
CCDC94Q9BW85 MIR7706-201ENST00000613747 67 ntBASIC19.05■□□□□ 0.64
CCDC94Q9BW85 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
CCDC94Q9BW85 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.05■□□□□ 0.64
CCDC94Q9BW85 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
CCDC94Q9BW85 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC94Q9BW85 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.05■□□□□ 0.64
CCDC94Q9BW85 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC94Q9BW85 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
CCDC94Q9BW85 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CCDC94Q9BW85 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC94Q9BW85 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC94Q9BW85 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCDC94Q9BW85 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
CCDC94Q9BW85 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CCDC94Q9BW85 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC94Q9BW85 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CCDC94Q9BW85 AC004817.3-201ENST00000602957 2129 ntBASIC19.04■□□□□ 0.64
CCDC94Q9BW85 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC94Q9BW85 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCDC94Q9BW85 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.04■□□□□ 0.64
CCDC94Q9BW85 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CCDC94Q9BW85 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.04■□□□□ 0.64
CCDC94Q9BW85 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CCDC94Q9BW85 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
CCDC94Q9BW85 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CCDC94Q9BW85 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms