Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NICN1Q9BSH3 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.44□□□□□ -0.1
NICN1Q9BSH3 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NICN1Q9BSH3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
NICN1Q9BSH3 DUX4L26-201ENST00000489078 1255 ntBASIC14.44□□□□□ -0.1
NICN1Q9BSH3 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC14.44□□□□□ -0.1
NICN1Q9BSH3 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.44□□□□□ -0.1
NICN1Q9BSH3 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.44□□□□□ -0.1
NICN1Q9BSH3 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.44□□□□□ -0.1
NICN1Q9BSH3 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.44□□□□□ -0.1
NICN1Q9BSH3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NICN1Q9BSH3 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
NICN1Q9BSH3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.44□□□□□ -0.1
NICN1Q9BSH3 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NICN1Q9BSH3 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NICN1Q9BSH3 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NICN1Q9BSH3 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NICN1Q9BSH3 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
NICN1Q9BSH3 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NICN1Q9BSH3 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
NICN1Q9BSH3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NICN1Q9BSH3 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
NICN1Q9BSH3 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
NICN1Q9BSH3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NICN1Q9BSH3 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NICN1Q9BSH3 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
NICN1Q9BSH3 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NICN1Q9BSH3 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.43□□□□□ -0.1
NICN1Q9BSH3 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
NICN1Q9BSH3 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
NICN1Q9BSH3 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NICN1Q9BSH3 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NICN1Q9BSH3 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NICN1Q9BSH3 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
NICN1Q9BSH3 INTS4P1-201ENST00000438455 1935 ntBASIC14.43□□□□□ -0.1
NICN1Q9BSH3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NICN1Q9BSH3 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NICN1Q9BSH3 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
NICN1Q9BSH3 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NICN1Q9BSH3 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NICN1Q9BSH3 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
NICN1Q9BSH3 AC024909.3-201ENST00000611513 2257 ntBASIC14.43□□□□□ -0.1
NICN1Q9BSH3 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.43□□□□□ -0.1
NICN1Q9BSH3 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NICN1Q9BSH3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NICN1Q9BSH3 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NICN1Q9BSH3 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
NICN1Q9BSH3 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NICN1Q9BSH3 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.43□□□□□ -0.1
NICN1Q9BSH3 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NICN1Q9BSH3 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
NICN1Q9BSH3 ACTG1P4-201ENST00000425123 1122 ntBASIC14.43□□□□□ -0.1
NICN1Q9BSH3 CHCHD2P8-201ENST00000429873 447 ntBASIC14.43□□□□□ -0.1
NICN1Q9BSH3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NICN1Q9BSH3 LINC01238-205ENST00000567549 1107 ntBASIC14.43□□□□□ -0.1
NICN1Q9BSH3 AC004817.3-201ENST00000602957 2129 ntBASIC14.43□□□□□ -0.1
NICN1Q9BSH3 LINC01023-201ENST00000606054 436 ntBASIC14.43□□□□□ -0.1
NICN1Q9BSH3 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NICN1Q9BSH3 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NICN1Q9BSH3 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.43□□□□□ -0.1
NICN1Q9BSH3 LINC00895-201ENST00000629028 1637 ntBASIC14.43□□□□□ -0.1
NICN1Q9BSH3 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NICN1Q9BSH3 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NICN1Q9BSH3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
NICN1Q9BSH3 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
NICN1Q9BSH3 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
NICN1Q9BSH3 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
NICN1Q9BSH3 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
NICN1Q9BSH3 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
NICN1Q9BSH3 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
NICN1Q9BSH3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NICN1Q9BSH3 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NICN1Q9BSH3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.43□□□□□ -0.1
NICN1Q9BSH3 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NICN1Q9BSH3 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NICN1Q9BSH3 AC006538.1-201ENST00000567905 1585 ntBASIC14.43□□□□□ -0.1
NICN1Q9BSH3 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
NICN1Q9BSH3 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC14.42□□□□□ -0.1
NICN1Q9BSH3 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.42□□□□□ -0.1
NICN1Q9BSH3 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NICN1Q9BSH3 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NICN1Q9BSH3 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NICN1Q9BSH3 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NICN1Q9BSH3 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.42□□□□□ -0.1
NICN1Q9BSH3 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.42□□□□□ -0.1
NICN1Q9BSH3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NICN1Q9BSH3 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NICN1Q9BSH3 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NICN1Q9BSH3 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NICN1Q9BSH3 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
NICN1Q9BSH3 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NICN1Q9BSH3 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NICN1Q9BSH3 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NICN1Q9BSH3 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.42□□□□□ -0.1
NICN1Q9BSH3 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NICN1Q9BSH3 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NICN1Q9BSH3 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC14.42□□□□□ -0.1
NICN1Q9BSH3 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NICN1Q9BSH3 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NICN1Q9BSH3 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms