Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.43□□□□□ -0.26
RNF2Q99496 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RNF2Q99496 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RNF2Q99496 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RNF2Q99496 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF2Q99496 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC13.42□□□□□ -0.26
RNF2Q99496 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RNF2Q99496 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC13.42□□□□□ -0.26
RNF2Q99496 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RNF2Q99496 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RNF2Q99496 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF2Q99496 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF2Q99496 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RNF2Q99496 RNF216P1-203ENST00000404404 2427 ntBASIC13.42□□□□□ -0.26
RNF2Q99496 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC13.42□□□□□ -0.26
RNF2Q99496 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF2Q99496 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF2Q99496 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF2Q99496 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RNF2Q99496 STX3-203ENST00000529177 1571 ntTSL 2 BASIC13.42□□□□□ -0.26
RNF2Q99496 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
RNF2Q99496 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF2Q99496 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC13.42□□□□□ -0.26
RNF2Q99496 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.42□□□□□ -0.26
RNF2Q99496 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.42□□□□□ -0.26
RNF2Q99496 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF2Q99496 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF2Q99496 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF2Q99496 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
RNF2Q99496 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RNF2Q99496 AC007967.3-201ENST00000434308 558 ntBASIC13.42□□□□□ -0.26
RNF2Q99496 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RNF2Q99496 AC109462.3-201ENST00000573934 613 ntBASIC13.42□□□□□ -0.26
RNF2Q99496 MIR3180-1-201ENST00000580374 94 ntBASIC13.42□□□□□ -0.26
RNF2Q99496 AP005901.3-202ENST00000581653 237 ntBASIC13.42□□□□□ -0.26
RNF2Q99496 MIR3180-3-201ENST00000584616 94 ntBASIC13.42□□□□□ -0.26
RNF2Q99496 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC13.42□□□□□ -0.26
RNF2Q99496 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF2Q99496 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF2Q99496 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC13.42□□□□□ -0.26
RNF2Q99496 AL138831.2-201ENST00000606564 490 ntBASIC13.42□□□□□ -0.26
RNF2Q99496 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RNF2Q99496 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
RNF2Q99496 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC13.42□□□□□ -0.26
RNF2Q99496 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF2Q99496 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF2Q99496 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF2Q99496 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC13.42□□□□□ -0.26
RNF2Q99496 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RNF2Q99496 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF2Q99496 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF2Q99496 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF2Q99496 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC13.42□□□□□ -0.26
RNF2Q99496 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
RNF2Q99496 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF2Q99496 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
RNF2Q99496 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF2Q99496 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC13.42□□□□□ -0.26
RNF2Q99496 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF2Q99496 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC13.42□□□□□ -0.26
RNF2Q99496 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RNF2Q99496 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF2Q99496 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF2Q99496 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RNF2Q99496 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RNF2Q99496 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RNF2Q99496 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RNF2Q99496 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC13.41□□□□□ -0.26
RNF2Q99496 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RNF2Q99496 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RNF2Q99496 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RNF2Q99496 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
RNF2Q99496 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RNF2Q99496 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RNF2Q99496 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RNF2Q99496 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
RNF2Q99496 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
RNF2Q99496 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RNF2Q99496 ATP5G2P1-201ENST00000433580 426 ntBASIC13.41□□□□□ -0.26
RNF2Q99496 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
RNF2Q99496 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC13.41□□□□□ -0.26
RNF2Q99496 MINOS1P3-201ENST00000457048 203 ntBASIC13.41□□□□□ -0.26
RNF2Q99496 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC13.41□□□□□ -0.26
RNF2Q99496 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC13.41□□□□□ -0.26
RNF2Q99496 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC13.41□□□□□ -0.26
RNF2Q99496 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC13.41□□□□□ -0.26
RNF2Q99496 AP000867.3-201ENST00000524675 377 ntBASIC13.41□□□□□ -0.26
RNF2Q99496 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RNF2Q99496 MPI-205ENST00000562606 1052 ntTSL 3 BASIC13.41□□□□□ -0.26
RNF2Q99496 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC13.41□□□□□ -0.26
RNF2Q99496 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
RNF2Q99496 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC13.41□□□□□ -0.26
RNF2Q99496 AC092329.2-201ENST00000598402 547 ntBASIC13.41□□□□□ -0.26
RNF2Q99496 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC13.41□□□□□ -0.26
RNF2Q99496 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC13.41□□□□□ -0.26
RNF2Q99496 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
RNF2Q99496 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC13.41□□□□□ -0.26
RNF2Q99496 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
RNF2Q99496 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RNF2Q99496 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms