Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDK5RAP1Q96SZ6 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.35■□□□□ 0.37
CDK5RAP1Q96SZ6 AC005237.2-201ENST00000434368 219 ntBASIC17.35■□□□□ 0.37
CDK5RAP1Q96SZ6 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.35■□□□□ 0.37
CDK5RAP1Q96SZ6 HLA-J-202ENST00000469281 1241 ntBASIC17.35■□□□□ 0.37
CDK5RAP1Q96SZ6 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDK5RAP1Q96SZ6 RNF34-208ENST00000555076 593 ntTSL 3 BASIC17.35■□□□□ 0.37
CDK5RAP1Q96SZ6 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDK5RAP1Q96SZ6 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDK5RAP1Q96SZ6 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.35■□□□□ 0.37
CDK5RAP1Q96SZ6 AC008267.7-201ENST00000624570 1194 ntBASIC17.35■□□□□ 0.37
CDK5RAP1Q96SZ6 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.35■□□□□ 0.37
CDK5RAP1Q96SZ6 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.35■□□□□ 0.37
CDK5RAP1Q96SZ6 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDK5RAP1Q96SZ6 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CDK5RAP1Q96SZ6 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDK5RAP1Q96SZ6 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDK5RAP1Q96SZ6 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CDK5RAP1Q96SZ6 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDK5RAP1Q96SZ6 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
CDK5RAP1Q96SZ6 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDK5RAP1Q96SZ6 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDK5RAP1Q96SZ6 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CDK5RAP1Q96SZ6 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDK5RAP1Q96SZ6 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDK5RAP1Q96SZ6 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDK5RAP1Q96SZ6 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
CDK5RAP1Q96SZ6 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDK5RAP1Q96SZ6 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDK5RAP1Q96SZ6 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.34■□□□□ 0.37
CDK5RAP1Q96SZ6 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDK5RAP1Q96SZ6 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
CDK5RAP1Q96SZ6 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDK5RAP1Q96SZ6 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.34■□□□□ 0.37
CDK5RAP1Q96SZ6 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CDK5RAP1Q96SZ6 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDK5RAP1Q96SZ6 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.34■□□□□ 0.37
CDK5RAP1Q96SZ6 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDK5RAP1Q96SZ6 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDK5RAP1Q96SZ6 AL627223.1-201ENST00000416693 442 ntBASIC17.34■□□□□ 0.37
CDK5RAP1Q96SZ6 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.34■□□□□ 0.37
CDK5RAP1Q96SZ6 KRT18P28-201ENST00000453838 1332 ntBASIC17.34■□□□□ 0.37
CDK5RAP1Q96SZ6 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDK5RAP1Q96SZ6 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDK5RAP1Q96SZ6 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.34■□□□□ 0.37
CDK5RAP1Q96SZ6 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
CDK5RAP1Q96SZ6 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDK5RAP1Q96SZ6 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.34■□□□□ 0.37
CDK5RAP1Q96SZ6 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.34■□□□□ 0.37
CDK5RAP1Q96SZ6 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDK5RAP1Q96SZ6 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CDK5RAP1Q96SZ6 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.34■□□□□ 0.37
CDK5RAP1Q96SZ6 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CDK5RAP1Q96SZ6 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
CDK5RAP1Q96SZ6 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDK5RAP1Q96SZ6 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDK5RAP1Q96SZ6 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDK5RAP1Q96SZ6 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.33■□□□□ 0.37
CDK5RAP1Q96SZ6 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CDK5RAP1Q96SZ6 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
CDK5RAP1Q96SZ6 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDK5RAP1Q96SZ6 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
CDK5RAP1Q96SZ6 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDK5RAP1Q96SZ6 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDK5RAP1Q96SZ6 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
CDK5RAP1Q96SZ6 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC17.33■□□□□ 0.37
CDK5RAP1Q96SZ6 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CDK5RAP1Q96SZ6 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.33■□□□□ 0.36
CDK5RAP1Q96SZ6 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CDK5RAP1Q96SZ6 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDK5RAP1Q96SZ6 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDK5RAP1Q96SZ6 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDK5RAP1Q96SZ6 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.33■□□□□ 0.36
CDK5RAP1Q96SZ6 SPCS2P4-201ENST00000436160 681 ntBASIC17.33■□□□□ 0.36
CDK5RAP1Q96SZ6 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.33■□□□□ 0.36
CDK5RAP1Q96SZ6 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.33■□□□□ 0.36
CDK5RAP1Q96SZ6 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CDK5RAP1Q96SZ6 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.33■□□□□ 0.36
CDK5RAP1Q96SZ6 AC027612.4-201ENST00000605371 583 ntBASIC17.33■□□□□ 0.36
CDK5RAP1Q96SZ6 AC009093.7-201ENST00000623853 1223 ntBASIC17.33■□□□□ 0.36
CDK5RAP1Q96SZ6 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.33■□□□□ 0.36
CDK5RAP1Q96SZ6 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDK5RAP1Q96SZ6 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDK5RAP1Q96SZ6 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDK5RAP1Q96SZ6 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDK5RAP1Q96SZ6 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDK5RAP1Q96SZ6 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDK5RAP1Q96SZ6 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CDK5RAP1Q96SZ6 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDK5RAP1Q96SZ6 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDK5RAP1Q96SZ6 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDK5RAP1Q96SZ6 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDK5RAP1Q96SZ6 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.33■□□□□ 0.36
CDK5RAP1Q96SZ6 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.33■□□□□ 0.36
CDK5RAP1Q96SZ6 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDK5RAP1Q96SZ6 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDK5RAP1Q96SZ6 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDK5RAP1Q96SZ6 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.32■□□□□ 0.36
CDK5RAP1Q96SZ6 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDK5RAP1Q96SZ6 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms