Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC12.75□□□□□ -0.37
AP1S3Q96PC3 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
AP1S3Q96PC3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP1S3Q96PC3 GPX4-207ENST00000589115 812 ntTSL 2 BASIC12.75□□□□□ -0.37
AP1S3Q96PC3 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC12.75□□□□□ -0.37
AP1S3Q96PC3 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
AP1S3Q96PC3 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
AP1S3Q96PC3 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC12.75□□□□□ -0.37
AP1S3Q96PC3 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC12.75□□□□□ -0.37
AP1S3Q96PC3 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC12.75□□□□□ -0.37
AP1S3Q96PC3 AL031595.1-201ENST00000623969 4709 ntBASIC12.75□□□□□ -0.37
AP1S3Q96PC3 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP1S3Q96PC3 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
AP1S3Q96PC3 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
AP1S3Q96PC3 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
AP1S3Q96PC3 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
AP1S3Q96PC3 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC12.75□□□□□ -0.37
AP1S3Q96PC3 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 AC073957.3-201ENST00000609998 6758 ntBASIC12.74□□□□□ -0.37
AP1S3Q96PC3 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 RHBDF1P1-201ENST00000427504 1941 ntBASIC12.74□□□□□ -0.37
AP1S3Q96PC3 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 AC024563.2-201ENST00000603282 481 ntBASIC12.74□□□□□ -0.37
AP1S3Q96PC3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 AC009154.2-201ENST00000621177 724 ntBASIC12.74□□□□□ -0.37
AP1S3Q96PC3 AL157888.1-201ENST00000631930 593 ntBASIC12.74□□□□□ -0.37
AP1S3Q96PC3 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 AC007950.2-201ENST00000615045 2347 ntBASIC12.74□□□□□ -0.37
AP1S3Q96PC3 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 AL603756.1-201ENST00000606511 2163 ntBASIC12.74□□□□□ -0.37
AP1S3Q96PC3 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC12.74□□□□□ -0.37
AP1S3Q96PC3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP1S3Q96PC3 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP1S3Q96PC3 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP1S3Q96PC3 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC12.73□□□□□ -0.37
AP1S3Q96PC3 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC12.73□□□□□ -0.37
AP1S3Q96PC3 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP1S3Q96PC3 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP1S3Q96PC3 AGGF1P2-201ENST00000426656 2106 ntBASIC12.73□□□□□ -0.37
AP1S3Q96PC3 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
AP1S3Q96PC3 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP1S3Q96PC3 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP1S3Q96PC3 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC12.73□□□□□ -0.37
AP1S3Q96PC3 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
AP1S3Q96PC3 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
AP1S3Q96PC3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC12.73□□□□□ -0.37
AP1S3Q96PC3 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms