Protein–RNA interactions for Protein: Q96LM1

LINC00615, Putative uncharacterized protein encoded by LINC00615, humanhuman

Predicted RBP Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00615Q96LM1 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00615Q96LM1 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00615Q96LM1 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00615Q96LM1 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00615Q96LM1 AC254562.1-201ENST00000417586 456 ntBASIC16.26■□□□□ 0.19
LINC00615Q96LM1 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.26■□□□□ 0.19
LINC00615Q96LM1 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.26■□□□□ 0.19
LINC00615Q96LM1 SPDYE11-202ENST00000450699 704 ntBASIC16.26■□□□□ 0.19
LINC00615Q96LM1 AC004967.1-201ENST00000453589 447 ntBASIC16.26■□□□□ 0.19
LINC00615Q96LM1 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.26■□□□□ 0.19
LINC00615Q96LM1 AP000344.2-201ENST00000512987 629 ntBASIC16.26■□□□□ 0.19
LINC00615Q96LM1 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.26■□□□□ 0.19
LINC00615Q96LM1 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00615Q96LM1 SPDYE9P-201ENST00000570642 692 ntBASIC16.26■□□□□ 0.19
LINC00615Q96LM1 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.26■□□□□ 0.19
LINC00615Q96LM1 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.26■□□□□ 0.19
LINC00615Q96LM1 SPDYE10P-202ENST00000612005 668 ntBASIC16.26■□□□□ 0.19
LINC00615Q96LM1 SPDYE8P-202ENST00000612377 668 ntBASIC16.26■□□□□ 0.19
LINC00615Q96LM1 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00615Q96LM1 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00615Q96LM1 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.26■□□□□ 0.19
LINC00615Q96LM1 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00615Q96LM1 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.26■□□□□ 0.19
LINC00615Q96LM1 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
LINC00615Q96LM1 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
LINC00615Q96LM1 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
LINC00615Q96LM1 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00615Q96LM1 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LINC00615Q96LM1 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
LINC00615Q96LM1 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00615Q96LM1 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00615Q96LM1 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00615Q96LM1 LINC01144-201ENST00000626198 1710 ntBASIC16.25■□□□□ 0.19
LINC00615Q96LM1 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00615Q96LM1 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.25■□□□□ 0.19
LINC00615Q96LM1 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
LINC00615Q96LM1 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.25■□□□□ 0.19
LINC00615Q96LM1 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00615Q96LM1 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
LINC00615Q96LM1 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00615Q96LM1 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
LINC00615Q96LM1 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00615Q96LM1 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00615Q96LM1 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.25■□□□□ 0.19
LINC00615Q96LM1 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.25■□□□□ 0.19
LINC00615Q96LM1 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00615Q96LM1 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.25■□□□□ 0.19
LINC00615Q96LM1 KRT8P48-201ENST00000515599 1220 ntBASIC16.25■□□□□ 0.19
LINC00615Q96LM1 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.25■□□□□ 0.19
LINC00615Q96LM1 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.25■□□□□ 0.19
LINC00615Q96LM1 AC006538.3-201ENST00000612495 578 ntBASIC16.25■□□□□ 0.19
LINC00615Q96LM1 AC139530.3-201ENST00000620344 690 ntBASIC16.25■□□□□ 0.19
LINC00615Q96LM1 AC134684.3-201ENST00000641758 218 ntBASIC16.25■□□□□ 0.19
LINC00615Q96LM1 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.25■□□□□ 0.19
LINC00615Q96LM1 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00615Q96LM1 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00615Q96LM1 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.25■□□□□ 0.19
LINC00615Q96LM1 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00615Q96LM1 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.25■□□□□ 0.19
LINC00615Q96LM1 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00615Q96LM1 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.25■□□□□ 0.19
LINC00615Q96LM1 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00615Q96LM1 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00615Q96LM1 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00615Q96LM1 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LINC00615Q96LM1 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.25■□□□□ 0.19
LINC00615Q96LM1 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.25■□□□□ 0.19
LINC00615Q96LM1 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
LINC00615Q96LM1 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00615Q96LM1 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
LINC00615Q96LM1 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.24■□□□□ 0.19
LINC00615Q96LM1 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00615Q96LM1 AC011676.5-201ENST00000624864 2660 ntBASIC16.24■□□□□ 0.19
LINC00615Q96LM1 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00615Q96LM1 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.24■□□□□ 0.19
LINC00615Q96LM1 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00615Q96LM1 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00615Q96LM1 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00615Q96LM1 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00615Q96LM1 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.24■□□□□ 0.19
LINC00615Q96LM1 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00615Q96LM1 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00615Q96LM1 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.24■□□□□ 0.19
LINC00615Q96LM1 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LINC00615Q96LM1 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00615Q96LM1 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00615Q96LM1 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.24■□□□□ 0.19
LINC00615Q96LM1 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.24■□□□□ 0.19
LINC00615Q96LM1 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.24■□□□□ 0.19
LINC00615Q96LM1 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LINC00615Q96LM1 AC079140.1-201ENST00000508039 487 ntBASIC16.24■□□□□ 0.19
LINC00615Q96LM1 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.24■□□□□ 0.19
LINC00615Q96LM1 LINC01225-203ENST00000563550 1244 ntBASIC16.24■□□□□ 0.19
LINC00615Q96LM1 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.24■□□□□ 0.19
LINC00615Q96LM1 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.24■□□□□ 0.19
LINC00615Q96LM1 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.24■□□□□ 0.19
LINC00615Q96LM1 AC073389.1-201ENST00000595595 795 ntBASIC16.24■□□□□ 0.19
LINC00615Q96LM1 AC022145.2-201ENST00000598203 171 ntBASIC16.24■□□□□ 0.19
LINC00615Q96LM1 AC008267.7-201ENST00000624570 1194 ntBASIC16.24■□□□□ 0.19
LINC00615Q96LM1 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms